| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0987 |
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| Symbol | |
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| ID | 6143256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1001819 |
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| End bp | 1002478 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641615874 |
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| Product | von Willebrand factor type A domain-containing protein |
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| Protein accession | YP_001743066 |
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| Protein GI | 170679715 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.233145 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC AAATCACGTT TGCCACCAGC GATTTTGCCA GTAACCCGGA ACCACGTTGC
CCCTGCATTT TGCTGCTGGA TGTTTCTGGT TCTATGAACG GTAGACCCAT TAATGAACTT
AACGCCGGAT TGGTTACCTT TCGCGATGAG CTGCTTGCTG ACCCGCTGGC CTTAAAAAGA
GTGGAACTCG GTATTGTGAC GTTCGGCCCA GTGCATGTGG AACAACCCTT TACCAGCGCC
GCTAATTTTT TCCCGCCCAT CCTGTTTGCC CAGGGCGATA CACCAATGGG CGCTGCCATT
ACCAAAGCCC TGGATATGGT AGAGGAGCGG AAACGTGAGT ATCGTGCAAA TGGTATTTCG
TATTATCGCC CGTGGATTTT CCTGATCACC GATGGCGCTC CAACCGATGA GTGGCAGGCT
GCCGCCAACA AAGTGTTTCA GGGGGAAGAA GATAAGAAGT TTGCCTTCTT TTCCATCGGT
GTTCAGGGGG CGGATATGAA GACTTTGGCA CAAATCAGCG TTCGTCAGCC TTTGCCATTG
CAGGGATTAC AATTCCGTGA ACTGTTTAGC TGGTTATCCA GTTCGCTGCG TTCGGTTTCC
CGCTCCACGC CGGGAACGGA AGTTGTGCTG GAAGCGCCAA AAGGCTGGAC GTCAGTGTGA
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| Protein sequence | MSEQITFATS DFASNPEPRC PCILLLDVSG SMNGRPINEL NAGLVTFRDE LLADPLALKR
VELGIVTFGP VHVEQPFTSA ANFFPPILFA QGDTPMGAAI TKALDMVEER KREYRANGIS
YYRPWIFLIT DGAPTDEWQA AANKVFQGEE DKKFAFFSIG VQGADMKTLA QISVRQPLPL
QGLQFRELFS WLSSSLRSVS RSTPGTEVVL EAPKGWTSV
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