| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0152 |
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| Symbol | |
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| ID | 6145151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 166703 |
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| End bp | 167287 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641615053 |
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| Product | fimbrial protein |
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| Protein accession | YP_001742269 |
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| Protein GI | 170681382 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00100089 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAAA AATTAGGTTT TGCCCTGTCT GGTCTTATGC TGGCAATGGT TGCAGGTAAT
GCTTCTGCTG CACTGGACGG TGGCCAATTA AATATCAGTG GTCTGGTAGT TGATAACACC
TGTGAAACCC GTGTTGATGG TGGCAACAAA GATGGCCTGG TGCTTCTGCA AACTGCAACT
GTTGCTGAAA TCAGTGCTGG CGTACTGAAT GACACCGTAG GTGCTAAAGC TAAACCTTTC
AGCATCACCG TTGACTGCAG CAATGCAAAC CCGAATCCTG GTAGCACCGC AAAAATGACC
TTCGGTTCCG TGTTCTTTGG CAACAGCAAA GGGACTCTGA ACAACGATAT GTCTATTAAC
ACGCCTTCTG ACGGCGTAAA TATTGCCCTG CACAATATTG ATGGTTCCAC TATCAAACAG
GTTCAAATTA ACAACCCAGG CGATATTTAC ACAAAAACGC TGGACGCTAC GACTAAATCT
GCAACCTATG ATTTTAAAGC ATCCTATGTC CGTGCTGAAG CAAGCCAGGC ACCAACTGCT
GGTTATGTTA AAACCAACAC TGCATATACC ATTACTTACC AGTAA
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| Protein sequence | MSKKLGFALS GLMLAMVAGN ASAALDGGQL NISGLVVDNT CETRVDGGNK DGLVLLQTAT
VAEISAGVLN DTVGAKAKPF SITVDCSNAN PNPGSTAKMT FGSVFFGNSK GTLNNDMSIN
TPSDGVNIAL HNIDGSTIKQ VQINNPGDIY TKTLDATTKS ATYDFKASYV RAEASQAPTA
GYVKTNTAYT ITYQ
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