5 homologs were found in PanDaTox collection
for query gene EcSMS35_0118 on replicon NC_010498
Organism: Escherichia coli SMS-3-5



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010498  EcSMS35_0118  putative colicin  100 
 
 
79 aa  167  5e-41  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.459764 
 
 
-
 
NC_010498  EcSMS35_0116  putative S-type colicin  82.81 
 
 
593 aa  120  7e-27  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.305649 
 
 
-
 
NC_010498  EcSMS35_0120  putative colicin  87.1 
 
 
62 aa  115  1.9999999999999998e-25  Escherichia coli SMS-3-5  Bacteria  normal  0.881635  normal  0.456191 
 
 
-
 
NC_007492  Pfl01_4761  S-type Pyocin  40 
 
 
416 aa  43.9  0.0007  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0685968 
 
 
-
 
NC_010465  YPK_4048  HNH endonuclease  34.85 
 
 
83 aa  43.5  0.0008  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>