Gene EcHS_A3816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3816 
Symbol 
ID5593202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3811875 
End bp3812651 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content54% 
IMG OID640922928 
ProductDNA-binding transcriptional repressor LldR 
Protein accessionYP_001460406 
Protein GI157163088 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGTTT TACCCAGACG CCTGTCAGAC GAGGTTGCCG ATCGTGTGCG GGCGCTGATT 
GATGAAAAAA ACCTGGAAGC GGGCATGAAG TTGCCCGCTG AGCGCCAACT GGCGATGCAA
CTCGGCGTAT CACGTAATTC ACTGCGCGAG GCGCTGGCAA AACTGGTGAG TGAAGGCGTG
CTGCTCAGTC GACGCGGCGG CGGGACGTTT ATTCGCTGGC GTCATGACAC ATGGTCGGAG
CAAAACATCG TCCAGCCGCT AAAAACACTG ATGGCCGATG ATCCGGATTA CAGTTTCGAT
ATTCTGGAAG CCCGCTACGC CATTGAAGCC AGCACCGCAT GGCATGCGGC AATGCGCGCC
ACACCTGGCG ACAAAGAAAA GATTCAGCTT TGCTTTGAAG CAACGCTAAG TGAAGACCCG
GATATCGCCT CACAAGCGGA CGTTCGTTTT CATCTGGCGA TTGCCGAAGC CTCACATAAC
ATCGTGCTGC TGCAAACCAT GCGCGGTTTC TTCGATGTCC TGCAATCCTC AGTGAAGCAT
AGCCGTCAGC GGATGTATCT GGTGCCACCG GTTTTTTCAC AACTGACCGA ACAACATCAG
GCTGTCATTG ACGCCATTTT TGCCGGTGAT GCTGACGGGG CGCGTAAAGC AATGATGGCG
CACCTTAGTT TTGTTCACAC CACCATGAAA CGATTCGATG AAGATCAGGC TCGCCACGCA
CGGATTACCC GCCTGCCCGG TGAGCATAAT GAGCATTCGA GGGAGAAAAA CGCATGA
 
Protein sequence
MIVLPRRLSD EVADRVRALI DEKNLEAGMK LPAERQLAMQ LGVSRNSLRE ALAKLVSEGV 
LLSRRGGGTF IRWRHDTWSE QNIVQPLKTL MADDPDYSFD ILEARYAIEA STAWHAAMRA
TPGDKEKIQL CFEATLSEDP DIASQADVRF HLAIAEASHN IVLLQTMRGF FDVLQSSVKH
SRQRMYLVPP VFSQLTEQHQ AVIDAIFAGD ADGARKAMMA HLSFVHTTMK RFDEDQARHA
RITRLPGEHN EHSREKNA