Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2647 |
Symbol | trbJ |
ID | 5591848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 2660524 |
End bp | 2661318 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640921762 |
Product | conjugal transfer protein TrbJ |
Protein accession | YP_001459289 |
Protein GI | 157161971 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 0.783704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAA TGTTCCGAGT GGTTTCATTA CAAAGAGGGA TTTTAGCCGC TAAAAAAGCT TTAATAGTTC CTTTCGTGGC GTCCGTCATG GCATTACCGG TGAAGGCCGG AATTCCCGTT ATTGATGGCA CTAATGTGGT TCAGACCACA ATCAGTGCAG TTAACAATGT TCAGGCTGTG ACTAAACAAA TCCAGCAGTA CCAGACGCAG CTGCAGCAGT ATGAAAACAT GCTGCAGAAC ACCGTAGCTC CTGCGGCCTA TATCTGGGAT CAGGCAAATT CAACAATTAA TAAATTGTTG CAGGTGCAGG ATACCCTTAA TTACTACAAG AATCAGGCCG GGAGTCTCGA TGCGTACCTG AAACGATATC AGGATGTTAA TTACTACAGG ACATCACCTT GCTTTAACAG CAATGTTGAA TGTACCGCGT CTGAAATTAG TGCACTGCGT GAAGCTGAAC AGAACAGCTC AGAGGCGCGT AAAAAGGCTA ATGACGCAGT ATTTAAGGTA ATTGACGAAC AGCAGAACAC CCTGCAGAGC GATGCTGATA ATCTTGCCGA ATTACAAACT CAGGCAAGCG GCGCACAAGG GCAAATGGAA GCTATTCAGG CGGCAAACCA GCTTGCCAGT GCACAGACAA ATCAGTTACT GCAAATCCGC TCACTTCTGG TAGCCCAACA AAACGCTGTA GCAACACTGG CACAGGCTCA GGCAGATAAA GAATCACAAC AGATAGCCGC TGATGAAAAA GCGTTAGCTG GAGAGAATAC ACCAAGCCCG AAGCGAATTT GGTGA
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Protein sequence | MNLMFRVVSL QRGILAAKKA LIVPFVASVM ALPVKAGIPV IDGTNVVQTT ISAVNNVQAV TKQIQQYQTQ LQQYENMLQN TVAPAAYIWD QANSTINKLL QVQDTLNYYK NQAGSLDAYL KRYQDVNYYR TSPCFNSNVE CTASEISALR EAEQNSSEAR KKANDAVFKV IDEQQNTLQS DADNLAELQT QASGAQGQME AIQAANQLAS AQTNQLLQIR SLLVAQQNAV ATLAQAQADK ESQQIAADEK ALAGENTPSP KRIW
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