| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2027 |
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| Symbol | amyA |
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| ID | 5593820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 2025160 |
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| End bp | 2026647 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640921171 |
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| Product | cytoplasmic alpha-amylase |
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| Protein accession | YP_001458716 |
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| Protein GI | 157161398 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 64 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAATC CCACGCTGTT ACAATGTTTT CACTGGTATT ACCCGGAAGG CGGTAAGCTC
TGGCCTGAAC TGGCCGAGCG CGCAGACGGT TTTAATGATA TTGGTATCAA TATGGTCTGG
TTGCCGCCCG CCTATAAAGG CGCATCGGGC GGCTATTCGG TCGGCTACGA CTCCTATGAT
TTATTTGATC TAGGTGAGTT TGATCAGAAA GGCAGCATCC CTACTAAATA TGGTGATAAA
GCACAACTGC TGGCCGCCAT TGACGCCCTG AAACGTAATG ACATTGCGGT GCTGCTGGAC
GTGGTAGTCA ACCACAAAAT GGGCGCGGAT GAAAAAGAAG CTATTCGCGT GCAGCGTGTA
AATGCTGATG ACCGTACGCA AATTGACGAA GAAATCATTG AGTGTGAAGG CTGGACGCGT
TACACCTTCC CCGCTCGTGC CGGGCAATAC TCGCAGTTTA TCTGGGATTT CAAATGTTTT
AGCGGTATCG ACCATATCGA AAACCCTGAT GAAGATGGCA TTTTTAAAAT TGTTAACGAC
TATACCGGAG AAGGCTGGAA CGATCAGGTT GATGATGAAC TCGGTAATTT CGATTATCTG
ATGGGGGAGA ATATCGATTT TCGCAATCAT GCCGTGACGG AAGAGATTAA ATACTGGGCG
CGCTGGGTGA TGGAACAAAC GCAATGCGAC GGCTTTCGTC TTGATGCGGT CAAACATATT
CCGGCATGGT TTTATAAAGA GTGGATCGAA CACGTACAGG AAGTTGCGCC AAAGCCGTTG
TTTATTGTGG CTGAATACTG GTCGCATGAA GTCGATAAAC TGCAAACGTA TATTGATCAG
GTGGAAGGCA AAACCATGCT GTTTGATGCG CCGCTGCAGA TGAAATTCCA TGAAGCATCG
CGCATGGGTC GCGACTACGA CATGACGCAG ATCTTCACTG GGACGCTGGT GGAAGCCGAT
CCTTTTCACG CCGTAACCCT CGTTGCCAAC CACGACACCC AACCGTTGCA AGCCCTCGAA
GCCCCCGTCG AACCGTGGTT TAAACCGCTG GCGTATGCCT TAATTTTGTT GCGGGAAAAT
GGCGTTCCTT CGGTGTTCTA TCCGGACCTC TACGGTGCAC ATTACGAAGA TGTCGGTGGT
GACGGGCAAA CCTATCCGAT AGATATGCCA ATAATCGAAC AGCTTGATGA GTTAATTCTC
GCCCGTCAGC GTTTCGCCCA CGGTGTACAG ACGTTATTTT TCGACCATCC GAACTGCATT
GCCTTTAGCC GCAGTGGCAC CGACGAATAT CCCGGCTGCG TGGTGGTCAT GTCGAACGGA
GATGATGGCG AAAAAACCAT TCATCTGGGA GAGAATTACG GCAATAAAAC CTGGCGTGAT
TTTCTGGGGA ACCGGCAAGA GAGCGTAGTG ACAGACGAAA ACGGCGAAGC GACCTTCTTT
TGCAACGGCG GCAGCGTCAG CGTGTGGGTT ATCGAAGAGG TGATTTAA
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| Protein sequence | MRNPTLLQCF HWYYPEGGKL WPELAERADG FNDIGINMVW LPPAYKGASG GYSVGYDSYD
LFDLGEFDQK GSIPTKYGDK AQLLAAIDAL KRNDIAVLLD VVVNHKMGAD EKEAIRVQRV
NADDRTQIDE EIIECEGWTR YTFPARAGQY SQFIWDFKCF SGIDHIENPD EDGIFKIVND
YTGEGWNDQV DDELGNFDYL MGENIDFRNH AVTEEIKYWA RWVMEQTQCD GFRLDAVKHI
PAWFYKEWIE HVQEVAPKPL FIVAEYWSHE VDKLQTYIDQ VEGKTMLFDA PLQMKFHEAS
RMGRDYDMTQ IFTGTLVEAD PFHAVTLVAN HDTQPLQALE APVEPWFKPL AYALILLREN
GVPSVFYPDL YGAHYEDVGG DGQTYPIDMP IIEQLDELIL ARQRFAHGVQ TLFFDHPNCI
AFSRSGTDEY PGCVVVMSNG DDGEKTIHLG ENYGNKTWRD FLGNRQESVV TDENGEATFF
CNGGSVSVWV IEEVI
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