| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_4246 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 4610768 |
|---|
| End bp | 4612180 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | glycoside hydrolase family 1 |
|---|
| Protein accession | ACX41844 |
|---|
| Protein GI | 260451422 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAT TTCCAGAAAC ATTTCTTTGG GGTGGCGCAA CAGCTGCCAA TCAGGTGGAA
GGTGCCTGGC AGGAAGATGG CAAAGGGATC TCGACCTCAG ATTTACAGCC TCATGGCGTA
ATGGGAAAAA TGGAACCGCG CATCCTGGGG AAAGAGAATA TCAAAGATGT CGCCATCGAT
TTTTATCACC GTTACCCGGA AGATATCGCG TTATTTGCCG AGATGGGCTT CACCTGTCTG
CGTATTTCCA TTGCCTGGGC GCGAATTTTC CCTCAGGGCG ACGAAGTCGA ACCGAATGAA
GCGGGGTTAG CGTTTTACGA TCGGCTGTTT GATGAAATGG CGCAGGCGGG GATCAAGCCG
CTGGTAACGT TATCCCATTA CGAAATGCCA TATGGGCTGG TGAAAAACTA CGGCGGTTGG
GCTAATCGAG CGGTCATCGA TCACTTCGAG CATTACGCCC GCACGGTCTT TACTCGCTAC
CAACATAAAG TGGCGTTATG GCTGACGTTT AATGAAATCA ACATGTCGTT ACACGCGCCA
TTCACGGGCG TGGGGCTGGC AGAAGAGAGT GGCGAGGCGG AAGTTTATCA GGCTATCCAC
CATCAACTGG TTGCCAGTGC GCGGGCAGTT AAAGCCTGTC ATAGCCTGCT CCCCGAAGCG
AAAATCGGCA ATATGCTTCT CGGTGGGCTG GTTTACCCCC TCACCTGCCA GCCACAGGAT
ATGTTGCAGG CCATGGAAGA GAACCGGCGC TGGATGTTCT TTGGTGATGT TCAGGCGCGT
GGCCAGTATC CCGGCTATAT GCAGCGTTTC TTCCGCGACC ACAATATCAC CATTGAGATG
ACTGAAAGTG ACGCAGAAGA TTTAAAACAT ACCGTCGATT TCATCTCTTT TAGTTATTAC
ATGACTGGTT GTGTTTCCCA CGACGAAAGC ATTAATAAAA ATGCGCAGGG CAACATACTG
AATATGATCC CCAATCCGCA TCTGAAAAGT TCAGAGTGGG GGTGGCAAAT TGATCCGGTT
GGATTACGGG TTCTGTTAAA TACGCTTTGG GATCGTTATC AAAAACCGTT ATTTATTGTC
GAGAACGGAT TAGGCGCAAA AGACAGCGTT GAAGCGGATG GTTCGATACA GGACGATTAT
CGAATTGCCT ATTTAAACGA TCACCTGGTA CAGGTAAATG AAGCGATTGC CGATGGTGTG
GATATTATGG GGTACACCAG TTGGGGGCCA ATTGATTTAG TCAGTGCATC TCATTCACAA
ATGTCTAAGC GCTACGGCTT TATTTATGTG GATCGTGATG ATAATGGCGA AGGAAGCCTC
ACAAGAACAC GCAAGAAAAG CTTCGGATGG TATGCAGAGG TGATCAAGAC GCGGGGGCTG
TCATTAAAAA AAATAACCAT TAAAGCACCT TAA
|
|---|
| Protein sequence | MKAFPETFLW GGATAANQVE GAWQEDGKGI STSDLQPHGV MGKMEPRILG KENIKDVAID
FYHRYPEDIA LFAEMGFTCL RISIAWARIF PQGDEVEPNE AGLAFYDRLF DEMAQAGIKP
LVTLSHYEMP YGLVKNYGGW ANRAVIDHFE HYARTVFTRY QHKVALWLTF NEINMSLHAP
FTGVGLAEES GEAEVYQAIH HQLVASARAV KACHSLLPEA KIGNMLLGGL VYPLTCQPQD
MLQAMEENRR WMFFGDVQAR GQYPGYMQRF FRDHNITIEM TESDAEDLKH TVDFISFSYY
MTGCVSHDES INKNAQGNIL NMIPNPHLKS SEWGWQIDPV GLRVLLNTLW DRYQKPLFIV
ENGLGAKDSV EADGSIQDDY RIAYLNDHLV QVNEAIADGV DIMGYTSWGP IDLVSASHSQ
MSKRYGFIYV DRDDNGEGSL TRTRKKSFGW YAEVIKTRGL SLKKITIKAP
|
|---|
| |