| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_0337 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 377744 |
|---|
| End bp | 378829 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, GntR family |
|---|
| Protein accession | ACX38027 |
|---|
| Protein GI | 260447605 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGT TTCCTCTGCA AAGCCTGACG ATTATTGAGG CGCAGCAAAA GCAGTTTGCG
CTGGTGGATA GCATTTGTCG CCATTTCCCC GGCAGCGAGT TTCTTACTGG CGGTGATTTA
GGCTTAACGC CAGGACTGAA TCAACCGCGC GTTACCCAGC GTGTGGAACA GGTGCTGGCT
GATGCATTTC ACGCACAGGC TGCGGCGCTG GTGCAGGGCG CGGGGACTGG CGCGATTCGC
GCCGGGCTGG CGGCTTTGCT CAAACCGGGG CAGCGTCTTC TGGTGCATGA CGCGCCTGTT
TACCCGACGA CACGGGTTAT TATTGAGCAG ATGGGGCTGA CGCTTATTAC TGTTGATTTC
AATGACCTGT CGGCACTGAA GCAGGTCGTC GACGAGCAAC AACCGGATGC GGCGCTGGTG
CAGCATACGC GCCAGCAGCC GCAGGACAGC TACGTGCTGG CAGATGTGCT GGCAACGTTG
CGCGCGGCAG GTGTTCCAGC GTTAACCGAT GACAACTATG CGGTGATGAA GGTGGCTCGA
ATCGGCTGTG AATGCGGCGC GAATGTCTCG ACATTTTCCT GCTTCAAGCT ATTTGGGCCA
GAGGGTGTTG GTGCAGTGGT CGGCGATGCT GATGTTATCA ACCGTATTCG CGCCACGCTT
TACTCCGGCG GTAGCCAGAT CCAGGGCGCA CAGGCGCTGG AAGTATTGCG TGGTCTGGTG
TTTGCGCCAG TGATGCACGC GGTGCAGGCA GGGGTATCTG AACGGTTGCT GGCTTTGCTT
AACGGTGGTG CGGTGCCGGA AGTGAAAAGC GCGGTGATTG CTAATGCGCA GTCGAAGGTG
TTGATTGTCG AGTTTCATCA GCCGATTGCC GCCAGAGTGC TGGAAGAGGC GCAAAAGCGC
GGTGCCTTGC CTTACCCGGT GGGTGCAGAG TCGAAATATG AAATCCCGCC GCTCTTTTAT
CGCCTTTCCG GAACGTTTCG CCAGGCGAAT CCACAATCAG AACATTGTGC GATTCGCATT
AACCCGAATC GCAGCGGTGA AGAGACGGTG CTGCGGATTT TGCGTGAGAG TATTGCCAGT
ATTTAA
|
|---|
| Protein sequence | MKTFPLQSLT IIEAQQKQFA LVDSICRHFP GSEFLTGGDL GLTPGLNQPR VTQRVEQVLA
DAFHAQAAAL VQGAGTGAIR AGLAALLKPG QRLLVHDAPV YPTTRVIIEQ MGLTLITVDF
NDLSALKQVV DEQQPDAALV QHTRQQPQDS YVLADVLATL RAAGVPALTD DNYAVMKVAR
IGCECGANVS TFSCFKLFGP EGVGAVVGDA DVINRIRATL YSGGSQIQGA QALEVLRGLV
FAPVMHAVQA GVSERLLALL NGGAVPEVKS AVIANAQSKV LIVEFHQPIA ARVLEEAQKR
GALPYPVGAE SKYEIPPLFY RLSGTFRQAN PQSEHCAIRI NPNRSGEETV LRILRESIAS
I
|
|---|
| |