| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0250 |
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| Symbol | mfd |
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| ID | 3927985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia chaffeensis str. Arkansas |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007799 |
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| Strand | - |
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| Start bp | 232089 |
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| End bp | 235493 |
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| Gene Length | 3405 bp |
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| Protein Length | 1134 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 637901374 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_507071 |
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| Protein GI | 88658189 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATA TTAATAAAAT CTTCAATATT CCACAAACGC TAGAACCACT TGTCATAATA
AAAATGTATA TAAAAAAACT AATTCATTCT GCAATATATA TAGTCAATCA AGAAACACAA
CTACATAATC TAGCATCAAT ATTTAAGTTT TATGTTCCAA ATCTTGAAAT AATCATATTT
CCTGCATGGA ATTCAATACC ATATAAAAAA AATTCTCCAC ATAATTCAGT TATGGCAGAA
AGAATTAAAA CTCTATATTC CCTAATCACT AGACATAATG ATAATCCCTA TATTATTATT
TCAACAATTA ATGCAATTAC TCAAAAAGTA TTACACCAAA ATATCATATT ACAATCAGTA
TTAAAAATTA CATCTCTACA GAATATTACA AAAAACCATA TAGAAGATTA CTTAACCAAT
CACGGATACA GTCAATACTC AATAGTACAA GATATAGGTG AATTTGCCAC TTACAACAAC
ATCATTGACA TTTTTCCTAC AACTTATAAA AATCCCATAA GGATTCATTT AAATAATAAT
CTTATACAAT CAATTCACTA TTTCAATCGC CAAACACAAT TAATAGATAA TAACTCTTCT
TTAAATGAGG TTGTTATTTA TCCCACTTCT GAAATAATAA AACAAAAAAA AAATATAGAT
ATTTTTTCTA AAACCTATAA AACAAAACCA AACCAAGATC AAAACCTATT AAACACAATA
ATCTCTGGAA AGAAACACAT AGGAGAAGAA AATTTCTTGC CTTTATTTTA TAAAGAAGAA
TTACAAAATA TTTTTAACTA CATATCACAA AACACAACAT TAATATTTAA CGATAAGCTT
ATAAATGAAA TAAAAGAATA TAATAATCAG ATATACCTAA ATTACAGATC TCAACTATCC
TACCAAGTGC CTCCACCTCA ACTTTACGTT GATTCTGAAG AATTTAAAAT TATAACTAAA
CAGTTTCATA AAACTATATT CTCACAATCT GACAACACTA GTAATAATTC AGCCTATACC
GATAGAAATA TACATACTTC TTCCTTCAAC ATTACAGAAA AGATACAAAA CGTCCCAAAT
TTTAAAACAT TAGTACAAAA CAAACAAATC GACATATTTG AAATATTGAC ACAATATATC
AAAACTACAT GTCACACAAA AAAATTAATA ATAGCTTGTT ACTCTACTGG CTCTTTAGAA
TATATCCAAA ATAGACTTAG AACATTAAAT ATCAAACTAT GCAAAATAGA AAACTATCAG
GAAATATGCT CTTCATATAA TATTGCTATA TTACCAATAT ATCACAGCTT TATCTCAAAA
TATACTATTG TCATAGCAGA ACACGATCTA TTATATAAAC AAGAAACAAC TAATAAAAGT
AACATTTCAA ATATTATTAG CAATGATACT AACCTAGATA TTGGAGATAT AGTAATACAC
AAAGACTATG GTATTGGGAA AATAGTAGCA CTTGAAACTA CTAAAGTATT TGATAGTTAT
CATGATTTCA TCAAAATAGA GTACTATAAC AACGACAAAC TATTCTTACC TGTAGAAAAT
ATTAATCTTA TATCCAAGTA TGGACAACAA AATGTCAATG TTACCCTTGA TAAACTAGGC
AGTACATCAT GGCAACAACG TAAAACTAAA ATAAAAAACC ATATCAAAAA AATTGCAAAA
GAATTATTAA CTATAGAAGC AGCAAGAAGA CTCTCTACTG GCAAATCATT TTTCCCTGAT
GAAAATTATA AACACTTCTG TAATGAATTT TCTTATACTG AAACAGAAGA TCAATTACAA
GCCATAAAAG ACATGGAACA TGATCTATCA AGTGGTAAAA TAATGAATAG ATTAATTTGC
GGAGACGTTG GCTTTGGAAA AACGGAAATA GCTTTACGAG CAGCATTCTT AGTAGCAAGT
CAAAACTACC AAGTAGCAAT TATAGTACCA ACAACTCTAC TGTGCAGGCA ACATTTTATT
GTTTTTACTG AAAGATTCAA AAAATTTCCT AATATAAAAA TCAAACAATT ATCTAAAATT
GTTGCGAGAT CCGAAATAAA AAAAACTAAA GAAAGTTTAT CATGTGGACA AGTACATATA
ATAATAGGAA CACATGCCAT ATTAGCACAG GACGTTACGT TTGCTAACTT AAGCCTATTA
ATTATAGATG AAGAACAACA ATTTGGAGTA AAGCAAAAAG AATTACTAAA AAAAATCAAA
ACAAACGTTC ATGTAATTTC ACTATCTGCA ACTCCAATAC CACGGACACT GTACATGTCA
CTATGTGGAA TAAAAGATTT GAGTTTAATA AAAACACCAC CAAAAAATAG ATTAGCAGTT
ACAACTTATA CAACATATTA TGAAGAAACT ATAATAAAAG ATGCTATAAT ACGAGAGCAT
AATAGAGGCG GTAGAGTATT TTATGTTTGT CCACAAATTA GTAATATAAA AAGCATCAGC
GACAAGATAA GAAAATTAGT ACCAGAAATA AAAATGAACA CTGCCCATGG ACAACTTTCC
CCTACCCAAC TTGACACAAT AATGAACGAT TTTTTTGATG GCAAATTCAC AATATTACTT
ACTACATCAA TTATAGAATG TGGATTAGAT ATCCCTTTTG CCAATACAAT CATAATACAC
AATGCCGATA TGTTTGGATT AGCTCAACTC TACCAATTAA AAGGAAGAGT AGGACGTAGC
AGTACCAAGG GTTTTGCATA TTTTATATTA TCTGAAAAAG CAACCAATAA ATCTGCTATA
AAACTGGAGA TAATACAATC AATAGATTCT ATAAATTCAG GATTTAATTT ATCATTACAT
GACATGGATA TCAGAGGATT TGGTAATTTA GTGGGAGAAG AACAATCAGG TAACATAAAA
GATATAGGCA TTGAACTATA CCAACAAATG TTAGAAGAAG AACTTAACAT TTATAGTGAA
TATCCTAAAG ATCTTGACCA TATAAATATC AATATCAATG TTAATATAAG AATTCCTGAG
CATTACATTC AAGATATAGG ATTAAGAATG CGAGTATACA AAAAAATTGG CAGTCTTAAA
ACAAAAGAAG ACATAGATAA TTACTATATA GAGTTAACCA ATAAGTTTGG TAAATTGCCA
AACGAAGTAG AAAACTTATT GAACACCATA TATATAAAAC AACTGTGTGC AAATATTGGC
ATTTATGAAG TCGAACAAAT AAAAAACAGC ATCCTTTTAA AAATAGATAG CAATACAACT
CTTAAACAAA AAATTCTTAA TTATTTTATC AATAACCCTC TAACTTTTAA GATACAAAAC
AATAGTATAC TTATGCTAAT TAACAACAGT TCCAATTGCA TTATAAGTTT TATTATACAC
CACATTAGCA AAATAAACCT ATTAAACAAG AAAGCAATAT TATAA
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| Protein sequence | MNNINKIFNI PQTLEPLVII KMYIKKLIHS AIYIVNQETQ LHNLASIFKF YVPNLEIIIF
PAWNSIPYKK NSPHNSVMAE RIKTLYSLIT RHNDNPYIII STINAITQKV LHQNIILQSV
LKITSLQNIT KNHIEDYLTN HGYSQYSIVQ DIGEFATYNN IIDIFPTTYK NPIRIHLNNN
LIQSIHYFNR QTQLIDNNSS LNEVVIYPTS EIIKQKKNID IFSKTYKTKP NQDQNLLNTI
ISGKKHIGEE NFLPLFYKEE LQNIFNYISQ NTTLIFNDKL INEIKEYNNQ IYLNYRSQLS
YQVPPPQLYV DSEEFKIITK QFHKTIFSQS DNTSNNSAYT DRNIHTSSFN ITEKIQNVPN
FKTLVQNKQI DIFEILTQYI KTTCHTKKLI IACYSTGSLE YIQNRLRTLN IKLCKIENYQ
EICSSYNIAI LPIYHSFISK YTIVIAEHDL LYKQETTNKS NISNIISNDT NLDIGDIVIH
KDYGIGKIVA LETTKVFDSY HDFIKIEYYN NDKLFLPVEN INLISKYGQQ NVNVTLDKLG
STSWQQRKTK IKNHIKKIAK ELLTIEAARR LSTGKSFFPD ENYKHFCNEF SYTETEDQLQ
AIKDMEHDLS SGKIMNRLIC GDVGFGKTEI ALRAAFLVAS QNYQVAIIVP TTLLCRQHFI
VFTERFKKFP NIKIKQLSKI VARSEIKKTK ESLSCGQVHI IIGTHAILAQ DVTFANLSLL
IIDEEQQFGV KQKELLKKIK TNVHVISLSA TPIPRTLYMS LCGIKDLSLI KTPPKNRLAV
TTYTTYYEET IIKDAIIREH NRGGRVFYVC PQISNIKSIS DKIRKLVPEI KMNTAHGQLS
PTQLDTIMND FFDGKFTILL TTSIIECGLD IPFANTIIIH NADMFGLAQL YQLKGRVGRS
STKGFAYFIL SEKATNKSAI KLEIIQSIDS INSGFNLSLH DMDIRGFGNL VGEEQSGNIK
DIGIELYQQM LEEELNIYSE YPKDLDHINI NINVNIRIPE HYIQDIGLRM RVYKKIGSLK
TKEDIDNYYI ELTNKFGKLP NEVENLLNTI YIKQLCANIG IYEVEQIKNS ILLKIDSNTT
LKQKILNYFI NNPLTFKIQN NSILMLINNS SNCIISFIIH HISKINLLNK KAIL
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