Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5063 |
Symbol | |
ID | 6967364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 4710122 |
End bp | 4712149 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643388741 |
Product | type III secretion protein, HrcV family |
Protein accession | YP_002273167 |
Protein GI | 209395993 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4789] Type III secretory pathway, component EscV |
TIGRFAM ID | [TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.34381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAC TCTTAAATAT ATTTAAAAAA GCAGAGTCAT ATCACGATCT TATTCTGGCT CTCTTCTTCT TTATGGCTGT AATGATGATG ATTATTCCAC TACCAACAGT TGTGGTGGAT ATCATTATCG CGATTAATAT TTCGACAGCT TTACTTTTAT TAATGCTCTC AATCTATATA AAAAATCCTC TTGAACTAAC TTCTTTCCCC ACAATCCTGT TGATTACGAC GTTGATGCGC CTGTCGCTCA GTGTTAGTAC AACCAGACTT ATTCTGCTGC ATCACGATGC GGGTGACATT ATTTACTCCT TCGGTAACTT TGTTGTTGGC GGTAATATTG TTGTTGGCCT GGTTATTTTT ACTATTATCA CCATTGTTCA ATTTATGGTT ATTACAAAAG GGGCCGAGCG TGTTGCTGAA GTGAGTGCTC GTTTTTCCCT TGATGGTATG CCAGGAAAGC AAATGAGTAT TGATGGTGAT ATGCGCGCAG GCGTTATTGA CCCGCTTGAG GCAAAAGTTC TTCGCTCCCG AGTGCAAAAG GAAAGCCAGT TTTATGGTTC AATGGACGGG GCGATGAAGT TTGTAAAAGG GGACGCTATT GCTGGTATCA TTATTGTTTT AGTTAACCTT TTTGGTGGCG TGCTCATTGG TATGTGGCAA TTTGACATGC CATTTAGTGC GGCACTTAGC CTGTTTTCTG TATTGTCTGT CGGTGATGCT TTGGTTGCCC AGATCCCTGC GCTTATTATT TCTGTCACCG CAGGCGTGGT TGTTACTCGT GTGCCCGGTG AAAGCGAAAA AGAAGAAAAC CTTGCAGGTG ATATTGTTCA ACAGGTTTCT GTTAATAGTC GCCCTTTTTT AATCAGTGCC GCACTAATGC TCGTAATGGC GATTATTCCG GGCTTTCCTG CATTGGTCTT CTTATTTCTG GCGGTTTGCC TGTTGGGGAT AGCCTGGAAA TTACAGAAGA AAAGAACATT TGGAACTGGC AATAATAAGG ATGCTATGGG AGCTGATTTG TCTAATAGCC AAAACATCTC ACCGGGCGCT GAGCCATTGA TTTTAAACTT AAGTAGTAAT ATTTATAGTT CAGACATTAC ACAGCAAATT GAGGTCATGC GTTGGAATTT CTTTGAGGAA AGTGGAATTC CATTGCCTAA GATTATTGTT AATCCGGTTA AAAATAATGA TAGCGCAATA GAATTTTTGC TCTATCAAGA GTCAATATAC AAAGATACTC TTATAGATGA TACTGTCTAT TTTGAGGCTG GGCATGCAGA GATATCATTC GAATTTGTCC AGGAAAAGCT TTCGACTAAC TCTATCGTAT ATAAGACGAA TAAGACTAAT CAACAGCTCG CTCACCTTAC AGGTATGGAT GTTTATGCAA CAACAAATGA TAAGATAACG TTTTTGCTAA AGAAACTTGT ATTGTCTAAT GCCAAAGAGT TCATCGGCGT ACAAGAAACG CGTTATTTGA TGGACATCAT GGAGAGAAAA TATAACGAGC TTGTGAAAGA GCTGCAGCGC CAGCTTGGTT TGAGCAAAAT TGTTGACATC CTACAACGTC TCGTAGAGGA AAATGTCTCA ATTAGAGACC TGAGAACTAT CTTTGAGACG CTTATTTTTT GGTCAACAAA AGAAAAGGAT GTGGTTATCT TGTGCGAATA CGTTCGTATT GCCCTGCGTC GGCATATTTT AGGTCGCTAT AGCGTTAGCG GTACACTTCT GAACGTTTGG CTTATTGGCT CTGATATTGA AAATGAGCTA CGAGAGTCGA TCAGACAAAC GTCATCAGGT TCGTATCTGA ATATCTCACC GGAGCGAACT GAGCAGATAA TTGGCTTCTT AAAAAATATC ATGAATCCAA CGGGGAACGG CGTCATTCTG ACCGCTTTAG ATATCAGGCG CTATGTGAAG AAAATGATTG AAGGTTCGTT CCCGTCAGTC CCCGTGCTCT CTTTTCAGGA GGTTGGGAAT AATATCGAAC TTAAAGTATT AGGAACGGTA AATGATTTCA GAGCATGA
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Protein sequence | MNKLLNIFKK AESYHDLILA LFFFMAVMMM IIPLPTVVVD IIIAINISTA LLLLMLSIYI KNPLELTSFP TILLITTLMR LSLSVSTTRL ILLHHDAGDI IYSFGNFVVG GNIVVGLVIF TIITIVQFMV ITKGAERVAE VSARFSLDGM PGKQMSIDGD MRAGVIDPLE AKVLRSRVQK ESQFYGSMDG AMKFVKGDAI AGIIIVLVNL FGGVLIGMWQ FDMPFSAALS LFSVLSVGDA LVAQIPALII SVTAGVVVTR VPGESEKEEN LAGDIVQQVS VNSRPFLISA ALMLVMAIIP GFPALVFLFL AVCLLGIAWK LQKKRTFGTG NNKDAMGADL SNSQNISPGA EPLILNLSSN IYSSDITQQI EVMRWNFFEE SGIPLPKIIV NPVKNNDSAI EFLLYQESIY KDTLIDDTVY FEAGHAEISF EFVQEKLSTN SIVYKTNKTN QQLAHLTGMD VYATTNDKIT FLLKKLVLSN AKEFIGVQET RYLMDIMERK YNELVKELQR QLGLSKIVDI LQRLVEENVS IRDLRTIFET LIFWSTKEKD VVILCEYVRI ALRRHILGRY SVSGTLLNVW LIGSDIENEL RESIRQTSSG SYLNISPERT EQIIGFLKNI MNPTGNGVIL TALDIRRYVK KMIEGSFPSV PVLSFQEVGN NIELKVLGTV NDFRA
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