Gene ECH74115_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1804 
Symbol 
ID6969034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1720530 
End bp1721834 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content59% 
IMG OID643385749 
Producttail fiber protein 
Protein accessionYP_002270239 
Protein GI209397061 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3064] Membrane protein involved in colicin uptake 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.982324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.00650595 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAGTAA AAATTTCTGG CGTGCTTAAA GATGGCACAG GAAAACCAGT ACAGAACTGC 
ACCATTGTGC TGAAGGCCAG ACGAACCAGC AGCACGGTGG TGGTGAACAC GGTGGCCTCT
GAAAATCCGG ATGAAGCCGG ACGTTACAGC ATGGATGTTG AGTACGGTCA GTACAGCGTC
ATTCTGTTGG TGGAGGGATT TCCTCCGTCA CATGCCGGGA CCATCACCGT GTATGAAGAT
TCTCAACCCG GTACGCTGAA TGATTTTCTC GGTGCCATGT CGGAGGATGA CGTCCGGCCG
GAGGCACTGC GTCGTTTTGA ACTGATGGTG GAAGAAGCGG CGCGTCACGC TGAGGAGGCG
AAGAAGAATG CCGGAGAGGC GGAGACGTCC GCGAGGAATG CCGGCATATC AGCCAGTCAG
GCAGAAGAGA ACGCTGCAAA TGCTGACACT TCAGCAGGGG ATGCATCGGA GTCAGCCCGG
CAGGCGGCAG AAAGTGCAGC CGCTGCAAAG CAGTCAGAGG AGGCGTCCTC GTCCTCGGCC
TCTGCGGCCG CTCAAAAAGC CAGTGAGTCA TTACAAAGTG CAACAGATGC TGAGTTGTCA
AAAAAGACGG CAGAAAGTGC AGCCGGTAAT GCAGCCAGGG ATGCAACGAC CGCAGCAGAA
AAAGCCCGGG AGTCAGCAGA AAGCGCACAG TCAGCGGAAC AAAGCAGGAT AGCGGCGGAA
GAAGCCGTAA ACCGAATCCC CACCGTGGTG GGGCCTCCCG GGCCAAAGGG GGAACCGGGG
CCCGCGGGTC CTCAGGGGCC GAAGGGAGAT AAAGGAGAGC GTGGAGACAC CGGCCCGGCA
GGGGCAACCG GCGAACGGGG ACCGGCAGGT GATGCTGGTC CGGCAGGCCC GCAGGGGCCG
AAAGGTGACA GGGGAGAGAC CGGTCTGACG GGAAATGCAG GTCCACAGGG TCCAAAGGGA
GACACCGGGG CAGCAGGCCC GGCAGGCCCA CAGGGACCGA AAGGAGAAAC AGGTGCGGCT
GGCCCGGTGG GGGCAACCGG ACCTCAGGGA CCGAAGGGCG ACCCGGGGGA GACACAAATC
CGTTTTCGTC TGGGGCCGGC GAGCATTATT GAGACAAACA GCCATGGCTG GTTCCCGGGT
ACAGATGGTG CGCTCATCAC CGGACTGACC TTTCTTGCCC CCAAAGATAC CACACGGGTT
CAGGGTTTTT TTCAGCATTT GCAGGTCAGG TTTGGTGACG GGCCGTGGCA GGATGTTAAG
GGGCTTGATG AAGTGGGCAG TGATACAGGC AGAACAGGAG AATGA
 
Protein sequence
MTVKISGVLK DGTGKPVQNC TIVLKARRTS STVVVNTVAS ENPDEAGRYS MDVEYGQYSV 
ILLVEGFPPS HAGTITVYED SQPGTLNDFL GAMSEDDVRP EALRRFELMV EEAARHAEEA
KKNAGEAETS ARNAGISASQ AEENAANADT SAGDASESAR QAAESAAAAK QSEEASSSSA
SAAAQKASES LQSATDAELS KKTAESAAGN AARDATTAAE KARESAESAQ SAEQSRIAAE
EAVNRIPTVV GPPGPKGEPG PAGPQGPKGD KGERGDTGPA GATGERGPAG DAGPAGPQGP
KGDRGETGLT GNAGPQGPKG DTGAAGPAGP QGPKGETGAA GPVGATGPQG PKGDPGETQI
RFRLGPASII ETNSHGWFPG TDGALITGLT FLAPKDTTRV QGFFQHLQVR FGDGPWQDVK
GLDEVGSDTG RTGE