Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1287 |
Symbol | |
ID | 6971925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1299777 |
End bp | 1300937 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643385275 |
Product | putative aminomethyltransferase |
Protein accession | YP_002269770 |
Protein GI | 209395879 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.159154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCTC TTGCTGAATT TCACTTGAAA AATAATGCGG TAATGGGGGT ATATAACAAC CGTACCCTAC CTTCTTCTTA TCACGATGCT ATGACCGAAT ATAAAGCCGT TCGTGAAAAC GCGCTGCTGG TGGACTATTC TCACCTCTCT ATTGTTAGCG TCATGGGCGA TGATGCCTGG GCGCTGATCA ACCAGCTGGT TTCCGCAGAT GTCTCCATCA TTCGTGATGA GCAGGCAATC TACTCACTGG TGTTGAATGA AGAGGGCACC ATTCGCGGAG ACGTCTATGT GCTGTGCAGC ATTGACGGTT ATTACCTGCT TTCAGAAGAT ATTTCGGCTG CCGAATTGAT CGCCAGCATG AATACCATTC TCGAAAAAGC GGAAGAACTG GATATTCAAT CGATGCCTGA AATTCAGGAT ATGCGGGAAA ACAACTGGGG GGCAATCCTG CTCGAAGGCC CATACTCCTG GGAGATCATG TCTGAAATTC ATGGCTTTGA CGTGATTGGC CTGCCTTACT ACGAATACAT GAATACCGAG GAGGATCTGC TGCTCTTCCG CTGTGGTAAA CACGGTGAGT ATGCGTACAT GACCATCGGT GAGCAGGCGA AACTGGCGGA GCAGTGGGAA AAACTGTTAA CCGTTGGCGA GAAATACCTG ATGCAGACCG GCGGCCTGGA TTATCAAAAA ATCGTACGCC TCGAAAATCC GTGCTGGGAT GCCAGCCTCT GGGAAGGTCA GGCGGTGAAT CCGGTTCAGT TGCAGATGCA GTGGGCGGTG CAGTACGACA AAGATGATTT TATTGGCAAG GACGCGGTGA CAGAGCTATC CCAGGAGTAT ACCGGTAATA AACTCATCGG CATGATCGCA CAGGAAGAAT GCGAAGGCAT TGAGGCTGGC GATCGCGTGC TGGTGGAAGG TCAAGACGTG GGCTATGTCG TGAAGGCACT CTTTTCCCCA GCGTTGCAGC GTTTCATTGC CCTGACCCTG CTGGAAAAGG ATTACGCCTG GTCTGACATC AGCGGCTACG AAATTCAAAC TGCTCACGGA ATTATTCCGG CGCAATCAAA ATGTATGCCG TTTATTTATA ACCTGAGCAT GTTGGTTAGC CCAACTGAGC ACAGTTATAT CGACGCGTCA AAAAATAAAA GCGCAGCGTA A
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Protein sequence | MKSLAEFHLK NNAVMGVYNN RTLPSSYHDA MTEYKAVREN ALLVDYSHLS IVSVMGDDAW ALINQLVSAD VSIIRDEQAI YSLVLNEEGT IRGDVYVLCS IDGYYLLSED ISAAELIASM NTILEKAEEL DIQSMPEIQD MRENNWGAIL LEGPYSWEIM SEIHGFDVIG LPYYEYMNTE EDLLLFRCGK HGEYAYMTIG EQAKLAEQWE KLLTVGEKYL MQTGGLDYQK IVRLENPCWD ASLWEGQAVN PVQLQMQWAV QYDKDDFIGK DAVTELSQEY TGNKLIGMIA QEECEGIEAG DRVLVEGQDV GYVVKALFSP ALQRFIALTL LEKDYAWSDI SGYEIQTAHG IIPAQSKCMP FIYNLSMLVS PTEHSYIDAS KNKSAA
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