Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_2073 |
Symbol | truA |
ID | 4664208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 2409669 |
End bp | 2410562 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639820316 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_967516 |
Protein GI | 120603116 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0650804 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCC TCAGACTGAC CATCGCCTAC AAGGGCACAG ACCTGCATGG CTGGCAAGTT CAGGAACATG CCACACGCCC GCGCCCCCGC ACCGTTCAGG GAGTGCTCGA ACCCATCGTC TCGCGCATGG CAGGTGAACA GGTCCGACTC CATGCCGCAG GACGTACCGA CGCGGGAGTC CATGCCGACG GGCAGGTGGC GCACGTGGAC ATCCCCGACC ACAAGCTTGA TGTCGACTGG CAGAAGGCCA TCAACGCCCA GTTGCCTGAC GACATCTGCA TCCTCGATGT GCGCCGCGCA GCCGACGACT TCCATGCCCG CTTCGATGCC CTTGGCAAAC GCTATACCTA CAGGCTGTGG CTGACGCGCC GGTTCATCCC CCCCAAGCTT CACGGTCAGG TGTGGGCCAC CGGCCCCCTC GACGTCTATG CCATGGACAG GGCGGCGCGC CACCTTGCGG GCACGCACGA CTTCGCAGCC TTCCAGAATC AGGGGACCGA CGTCACCTCG ACGGTGCGAA CCGTCCATGC CATCAGGCGC TGCCCCTCAG GGACATTGCC AGCCGGGGCC CTGCTCACGT ATGGCGAACC ATACACCTCA TGGCGATGCA CGGGAACGCA CCCTGACCAG CCTCCCGCAA CGGCTGGACA TCCGCTGGCG GGCATCGGGC TTGAGCTTGT GTGGTCCTTC GAGGGGGACG GGTTCCTCAA ACAGATGGTG CGCAACATGA TGGGTCTGCT GGTGGCTGTA GGACGCGGTG CCCTCGCCGC CGATGACGTG CCGGGCATCA TGGCGACCCT CGACCGTTCG CGGGCCCCTG CCACCGCGCC AGCCTGTGGG CTCACACTTT CGGAAGTCTA TTATCCACCT TGCGACTACC CCTACGCCCG CTGA
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Protein sequence | MARLRLTIAY KGTDLHGWQV QEHATRPRPR TVQGVLEPIV SRMAGEQVRL HAAGRTDAGV HADGQVAHVD IPDHKLDVDW QKAINAQLPD DICILDVRRA ADDFHARFDA LGKRYTYRLW LTRRFIPPKL HGQVWATGPL DVYAMDRAAR HLAGTHDFAA FQNQGTDVTS TVRTVHAIRR CPSGTLPAGA LLTYGEPYTS WRCTGTHPDQ PPATAGHPLA GIGLELVWSF EGDGFLKQMV RNMMGLLVAV GRGALAADDV PGIMATLDRS RAPATAPACG LTLSEVYYPP CDYPYAR
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