Gene Dvul_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1516 
Symbol 
ID4665053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1801674 
End bp1803209 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content65% 
IMG OID639819749 
Productphosphoglyceromutase 
Protein accessionYP_966960 
Protein GI120602560 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0696] Phosphoglyceromutase 
TIGRFAM ID[TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0683605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000804177 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCCTGA AACCCACGCT CCTGCTTATC CTCGATGGCT GGGGCAAGGC CCCTGCGGGG 
CCCGGCAACG CCGTGACCCT CGCCGGGATG CCTCACCTCT CCTCGTTGCT TCGACAGGCG
GGCGGTACGG AACTCGCCTG TTCCGGTCGT GCCGTGGGGT TGCCTGAAGG ATTCATGGGC
AACTCCGAGG TCGGTCATAT GAACATCGGG GCAGGGCGCG TGGTGTATCA GGACATGACC
CGGATAGACA TCGCCGTCGA GCGGGGCGAA CTTGCCAGCA ACCCCGCTTT GACGAGGTTG
TTCGAAGCCG TGCGCGCCAC TGGTGGCAGA CTCCATCTCA TGGGGCTGCT TTCAGATGGC
GGCGTGCATA GCCATATCGC CCATGTGGAG GCGTTGGCCC TTGCGGCGCG GGACGCGGGG
GTCGAGGTCG TGGTGCATGC CTTCCTCGAC GGGCGCGATA CAGCCCCCAC CTCCGGTGTC
GGCTATGTGA AGCGCCTCGC CTCGTTCCTT GAAAGCAACC GTGCGGGACG CATCGGCAGT
CTCGTCGGGC GCTACTACGC CATGGACCGC GACAAGCGCT GGGACCGCAA CCTGCTTGCG
TGGGCGATGC TGACACGCGG CGAGGGTGCG CCCGCGGACG ACCCGGTCGG CGCGGTCGAA
GCGGCCTATG CCGCGGGCGA GACGGACGAG TTCGTCAAGC CGCGGGTCGT GGTCGAGGGC
GGTACCGCCA TCGGTACCAT CCGGGATGGT GACGGGGTGT TCTTCTTCAA TTTCCGGGCA
GACCGGGCGC GGCAGTTGTC GCACATGTTC GTCGACGGAA CGTTCGAGCA TGGCGACCGG
GGGCATGTTC CCTCGCTTGC GGGGTTCGCT ACCATGACCT CCTACGACCC CGCCCTCGGG
CTTCCCGTCG CTTTCGACAA GCAACCCCTC GACGGTACGC TGGGGGAAGT CGTGGCGAAT
CAGGGACTGC GCCAGCTGCG TATCGCCGAG ACCGAGAAGT ATGCGCATGT CACCTACTTC
CTCAACTGCG GGCGTGAAGA ACCGTTTCCG GGCGAGGAAC GCCGCCTGTT GCCGTCGCCG
CGTGATGTCG CCACGTACGA CCTCAAGCCC GAGATGAGCG CAGAAGCCGT CACCGATACG
CTTCTCGAGG AATGGGCGGG CGGGGGCTAC ACACTTGCCG TGTGCAATCT CGCCAATCTC
GACATGGTCG GACACACCGG GGTCATCCCC GCTGCCGTGC GCGCCTGCGA GACAGTGGAT
GCATGCGTTG GCCGCATCGC TGATGCCGTA CTGGCGTCGG GCGGACGGCT GGTCATCACC
GCCGACCACG GCAACGCCGA GGAGTTGCTC GATGAGTCGG GCAATCCGCA GACGGCCCAC
AGCATGAACC GCGTTCCTTT CACCGTGGTC GAACAGGGGC GCGTCCATAC TTTTCGTGAG
GGTGGTGTCC TTGGTGACAT CGCTCCTACC ATACTCGGCT TGTGGGGTGT GCCTGCTTCG
GCTGGCATGA CCGGAACGAG CCTCATCACG GAGTGA
 
Protein sequence
MSLKPTLLLI LDGWGKAPAG PGNAVTLAGM PHLSSLLRQA GGTELACSGR AVGLPEGFMG 
NSEVGHMNIG AGRVVYQDMT RIDIAVERGE LASNPALTRL FEAVRATGGR LHLMGLLSDG
GVHSHIAHVE ALALAARDAG VEVVVHAFLD GRDTAPTSGV GYVKRLASFL ESNRAGRIGS
LVGRYYAMDR DKRWDRNLLA WAMLTRGEGA PADDPVGAVE AAYAAGETDE FVKPRVVVEG
GTAIGTIRDG DGVFFFNFRA DRARQLSHMF VDGTFEHGDR GHVPSLAGFA TMTSYDPALG
LPVAFDKQPL DGTLGEVVAN QGLRQLRIAE TEKYAHVTYF LNCGREEPFP GEERRLLPSP
RDVATYDLKP EMSAEAVTDT LLEEWAGGGY TLAVCNLANL DMVGHTGVIP AAVRACETVD
ACVGRIADAV LASGGRLVIT ADHGNAEELL DESGNPQTAH SMNRVPFTVV EQGRVHTFRE
GGVLGDIAPT ILGLWGVPAS AGMTGTSLIT E