Gene Dvul_1032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1032 
SymboltnaA 
ID4664145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1265655 
End bp1267043 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content63% 
IMG OID639819256 
Producttryptophanase 
Protein accessionYP_966479 
Protein GI120602079 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3033] Tryptophanase 
TIGRFAM ID[TIGR02617] tryptophanase, leader peptide-associated 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCA TTCCCGAACC GTTCCGCATC AAGATGATCG AACCCATTCG CATGACCACC 
CTCGAAGACC GCACCAGGGC ACTCGAAGAG GCGGGGTACA ACCCCTTCCT TCTCAAGAGC
GAGGATGTGT ACATCGACCT GCTGACCGAC TCCGGCACCG GTGCCATGAG CGACCGTCAG
TGGGCGGGCC TCATGATGGG CGACGAGGCT TACGCTGGTA GCCGCAACTT CCTGAATCTC
GAAAAGGCCG TGAAGGACGT GTTCGGCTAC GAGCACACCG TCCCCACCCA CCAGGGGCGC
GGCGCCGAAC AGATTCTCTT CCCCTGCCTT GTGGCCCGCA TGAAGGGCGA CAAGCCCGTC
TTCATCTCCA ACTACCATTT CGACACCACC GCCGCCCACG TCGAGATGAC GGGCGCCAAG
GCCATCAACG TGGTCACCGA GAAGGCGTTC GACACCGGCA CCTACTACGA CTGGAAGGGC
GACTTCGACC TTGAGAAGCT CGAAGCCACC ATCAGGCAGC ATGGCGCGCA GAACGTGGCT
GGCATCATCG TCACCATCAC CTGCAACAGC GCAGGCGGCC AGCCCGTCTC CATGGCGAAC
ATCCGCGAGG CAGCAGCCAT CGCCAAGCGC CATGGCATCA CCGTCATCAT CGACTCCGCC
CGTTTCTGCG AGAACGCATG GTTCATCAAG CAACGCGAGG CCGGATACGC CGACAAGTCC
ATCCGTGAGA TCATCCGCGA GATGTACTCC TACGGCGACG TGCTCACCTG CTCCGCCAAG
AAGGACCCCA TCGTCAACAT CGGCGGTCTC TGCTGCATCA AGGAGGACGT CGACCTCTTC
CGTGCCGTGC AAGTCCGCTG CGTGCCCATG GAAGGCTTCG TCACCTACGG CGGCCTTGCC
GGACGCGACA TGGAAGCGCT GGCCATCGGT CTCTATGAAG GAACTGACGA ACACTTCCTC
ACCTACCGCA TCAAGCAGGT CGAATACCTC GGTGAACGTC TGCGTCAGGG CGGGGTTCCC
ATCCAGTACC CCACCGGCGG TCACGCCGTG TTCATCGACG CCAAGCTGAT GCTGCCCCAC
ATTCCGGGCA ACCAGTTCCC GGCACACGCC CTCGCCAATG AGGTCTACAT CGAAGGCGGC
GTGCGCGGCG TCGAGATAGG TTCGCTGCTG CTCGGGCGCG ACCCCGCCAC CGGCCTGCAG
AAGGAATCGC CGCTGGAACT GCTGCGCCTC GCCATCCCGC GCCGCGTCTA CACCAACGAC
CACATGGACT ACATCGCCGA CACGGTCATC GCCGTGCTCG ACCGCGCGTC GTCCATCAAG
GGCCTTGAGT TCACCTACGA ACCGCCGGTG CTGCGTCACT TCACCGCGCG TCTGCGCCCC
ATCGCCTGA
 
Protein sequence
MKRIPEPFRI KMIEPIRMTT LEDRTRALEE AGYNPFLLKS EDVYIDLLTD SGTGAMSDRQ 
WAGLMMGDEA YAGSRNFLNL EKAVKDVFGY EHTVPTHQGR GAEQILFPCL VARMKGDKPV
FISNYHFDTT AAHVEMTGAK AINVVTEKAF DTGTYYDWKG DFDLEKLEAT IRQHGAQNVA
GIIVTITCNS AGGQPVSMAN IREAAAIAKR HGITVIIDSA RFCENAWFIK QREAGYADKS
IREIIREMYS YGDVLTCSAK KDPIVNIGGL CCIKEDVDLF RAVQVRCVPM EGFVTYGGLA
GRDMEALAIG LYEGTDEHFL TYRIKQVEYL GERLRQGGVP IQYPTGGHAV FIDAKLMLPH
IPGNQFPAHA LANEVYIEGG VRGVEIGSLL LGRDPATGLQ KESPLELLRL AIPRRVYTND
HMDYIADTVI AVLDRASSIK GLEFTYEPPV LRHFTARLRP IA