| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0999 |
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| Symbol | |
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| ID | 4663919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 1228159 |
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| End bp | 1230081 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639819223 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_966447 |
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| Protein GI | 120602047 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.970102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCATTC CGTGCAGCCG TCCCCTGTTC ATCGAGCCTT TCGACCTCTA CCTCTTCGGC
ATGGGGCGGC ACAGGCACCT CTACCGCATT CTCGGCGCAC ACCCGGCCGT ACAGGATGGC
GAGGCGGGCT ATCGCTTTGC GGTGTGGGCC CCCAATGCCC GTTCCGTGCA CCTGTCCGGC
GACTGCAACG GTTGGAGGCA TGAGGGCTGC CCCCTTTTCC CCGTGGGGGT GTCGGGCGTA
TGGGCCGCCT TCGTGCCCGG AGTGCGCCGC GGGTCGCTTT ACAAGTTCGT GGTGCGTGGG
GCCGATGGTC GGCAAGAGCA GAAGGCCGAC CCCTTCGCCC TGTGGGCGGA GATGCGCCCC
GGGGTGGCGT CGGTGGCATG GGATATCGAC AACCATGCAT GGGGCGACGG GGCGTGGATG
GCTGAACGGG CGCGTCAGGG GCTGCCCCTC GAACGTCCGG TCTCCATCTA CGAGGTGCAT
CTCGGGTCGT GGCGGCGCAG GCATGGCGAC GGCCATCCGT TCCTGACCTA CGATGAACTG
GGCGACCAGC TCATTCCCTA TGCCACTGGC ATGGGTTTCA CCCACCTCGA ACTGCTGCCC
GTGGCGGAAC ACCCCCTCGA CCAGTCGTGG GGGTACCAGA CGGGGCACTA CTACGCGCCG
ACCTCGCGTT TCGGTTCGCC GGAAGGGTTC AAGCGGTTCG TCGACAGGTG CCATCAGGCA
GGGCTTGGCG TCATCCTCGA CTGGGTCCCG GCCCATTTCC CGCGGGACGC ATGGAGTCTT
GGGCGTTTCG ATGGCACGGC GCTGTATGAG CACCTCGACC CGCGCCTTGG CGAACACCCC
GACTGGGGAA CCTACATCTT CAACTACGGG CGCAACGAGG TGCGCAACTT CCTCACCGCC
AATGCCCTGT ACTGGCTGCG GGAGTTCCAC ATCGACGGTC TGCGCATGGA CGCCGTGGCG
TCCATGCTCT ACCTCGACTA CTCGCGCGAA GCGGGGCAGT GGCTGCCCAA CAGGCATGGC
GGACGCGAGA ACCTCGATGC CGTGGACTTC CTGCGCGAGG TCAACACGGT CATCCATGCC
GAGTTTCCCG GTGCCATGAC GCTGGCGGAG GAATCCACCG CATGGCCCGG TGTCTCCCGT
CCGGTCTACA CGGGCGGACT GGGGTTCAGC TTCAAGTGGA ACATGGGCTG GATGCATGAC
ACGCTGGGTT ACCTTGCAGA AGACCCGATA CACCGGGCCT ATCACCACGG TTCGCTGACC
TTCTCCATGC TCTACGCCTT CAGCGAGAAT TTCGTGCTGC CGCTGTCACA TGACGAGGTC
GTGCACGGCA AGGGGGCGCT GCTGTCCAAG ATGCCCGGCG ACATGTGGCA GCAACAGGCC
AACCTGCGGT TGCTCTATGC CTACCAGTGG GCGCATCCCG GCAAGAAGCT GCTGTTCATG
GGGGGCGAAT TCGGCCAGTG GAACGAGTGG GACGAAAGCC GCGAACTGGA CTGGTGTCTC
TACCGTTTCC CCGCCCATGA GGGCATCGCG CGGCTGGTGG GCGACCTCAA CCGGTTGCTG
CGTTCCGAAC CTGCCATGCA CAGGCGCGAC CACGACTGGT CGGGCTTCCG CTGGGTGGAT
TTCGCGGACT ACGGCAGTTC GGTGATCAGT TTCCTCCGGC TGGCCGAAGG TGAACGACCT
CTCCTGTGGA TTTTCAACTT CACGCCGGTG GTGCGGCGCT TCTACCGTGT GCCCTGTCCG
CGTGGCGGCA CATGGCGTGA GCTGTGCAAC ACCGACAGTG CCTACTACGG CGGCAGTGAC
GTGGGTAACG CCGGTGCCGT CATGGCACGG GAAGACCACT GGGGTGGCGG GCACTTCATC
GAACTGACGC TACCCCCGCT TGCCGCCATG TGCTTCGCCC CCGTGACAGG GCAGGGCACC
TAG
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| Protein sequence | MTIPCSRPLF IEPFDLYLFG MGRHRHLYRI LGAHPAVQDG EAGYRFAVWA PNARSVHLSG
DCNGWRHEGC PLFPVGVSGV WAAFVPGVRR GSLYKFVVRG ADGRQEQKAD PFALWAEMRP
GVASVAWDID NHAWGDGAWM AERARQGLPL ERPVSIYEVH LGSWRRRHGD GHPFLTYDEL
GDQLIPYATG MGFTHLELLP VAEHPLDQSW GYQTGHYYAP TSRFGSPEGF KRFVDRCHQA
GLGVILDWVP AHFPRDAWSL GRFDGTALYE HLDPRLGEHP DWGTYIFNYG RNEVRNFLTA
NALYWLREFH IDGLRMDAVA SMLYLDYSRE AGQWLPNRHG GRENLDAVDF LREVNTVIHA
EFPGAMTLAE ESTAWPGVSR PVYTGGLGFS FKWNMGWMHD TLGYLAEDPI HRAYHHGSLT
FSMLYAFSEN FVLPLSHDEV VHGKGALLSK MPGDMWQQQA NLRLLYAYQW AHPGKKLLFM
GGEFGQWNEW DESRELDWCL YRFPAHEGIA RLVGDLNRLL RSEPAMHRRD HDWSGFRWVD
FADYGSSVIS FLRLAEGERP LLWIFNFTPV VRRFYRVPCP RGGTWRELCN TDSAYYGGSD
VGNAGAVMAR EDHWGGGHFI ELTLPPLAAM CFAPVTGQGT
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