Gene DvMF_1034 details

Gene Information

• Locus tag: DvMF_1034
• ID: 7172930
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 1253821
• End bp: 1257135
• Gene Length: 3315 bp
• Protein Length: 1104 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643539541
• Product: hypothetical protein
• Protein accession: YP_002435457
• Protein GI: 218886136
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 72
• Fosmid unclonability p-value: 0.881671
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACGCCA AGGGCTTTAC CCTCATCGAA GTTACCGTAG TGCTGGTACT GGCGGGCCTG 
CTGGCCGCCG TGGCCGGGGT GGGCATCGTC ACCGGGGCGC GCAGCTTCGT GACGGCGCGC 
GAAGCCAGCG ACCTGGCGCA GGAAGCGCAA CTGGCCATGG ACCGCCTGAC CCGCGAGATT 
GTGGAACTGG TGGACATACC TGCCAACAGT TCCTCCACCC TGCTGGTGCT TCGCAACGTG 
GGCGCGCAAG GTACGGCGCA ATTCAACCGA TCCATCCAGT ACGTGGCCAA CGCGCAGGCG 
ATACGCATCG CCGACGGCAC CGGCGGCGCG ACCAACGGCG ATACGCTCAT CGACAACGTG 
ACTGCCTTCA GCCTGACCTA CTGGCAGGAA GACACTTCCA CCACCTCGTG GGCCTCTACC 
AACGATGCCC GGCTGCTGTC CGCCATCGAC GTCAATTTCA CCCTTACGGC GCCGGGCGGC 
ACCACGCGCC AGTTCGTCAA CCGTATCGTG CCCCGCAACA ACGAAAACCG GGGCGGGGCC 
AGCCCCAACT CCGCGCCGCC ATCGCTGGCC CGGTACGACG TGTGCTTCGT GGCAACTGCG 
GCGGCGGGCA ATGGCGATCA CCCGGTGGTG GTGCAACTGC GCCAGTTCCG CGACAGGCTG 
CTGCTGCCAT GGTCCGGTGG GCGGGCACTG GTGCGAGCTT ATTACGCCGT GGGGCCGGAC 
ATGGCCCGCG TGGTTGCCGC GCACGAGCCT TTGCGTGCCG CCACCCTGGC CGCCCTGACG 
CCGGTTGCCG CGCTGGCGGG GCTGGCCGTG CATGCGCCAG GATGGCTGGC GGCCTGCGTG 
GTGCTTTCCG CCCTGCTGGT GGCGGTGACG GGCCGTGCCC TGCGCCGGGG CAGCACCGCC 
GCGCGCGCGG CCATGGACAC TGCCATGGGC ACCGCTCGCA ACGCCGGGCA GCGCGGGGCC 
GTGCTGCTGA GCGCCATCGT GACCATTGTG GCCTTTTCCG TACTGGCCGC CACCATGGTG 
CCCATGATGA CCGGGTCCAT GATGGGCGAA ATTTCAGCCG TGCAGGGTGA CCAGGCCTAC 
TACCTTGCGG AATCGGGCTT TGGCGCTGCG GGCAGCATGT TTCTTGCGGC AGGCGACGAG 
CAGGCCCGCA AGAACCTGCT GGAGACCATG GATGGTTCCA CCTACACCTT TGCCAACAAC 
GCCGGGTCAT TCACCCTGGG GGTGGAGCCC TACTGGTACG AGGTCACCAA CAATACCGGC 
ACCACCCTGA CCACGCGCGC CTACGGCACG CCGCCCACCC TGCCCACCAA CACGTCGGGG 
CGCATCCGCG CGGGCACCGG GTCCACCTTC TATGCCTATA GCAACATTTC CGTTTCAGGC 
GACACGGTAA CCTTCACCCT GACCAGTACG CCTTCACCGC TTATCGCATC GGGCACGGAC 
ATCTTCTTCA GCGCGCGGCC CAGTGCCAGC CAGACCGTGA CGGAACGCGG CAACCTTACC 
CTTACCGCCA GCAACGCCGC CGCCTTTCCC AACGTCAACG GCATGTTCAC CATACGCGAC 
GGCGCCACCC ACACCGGACG CGTGGCCTAC GTGTACCGCC GCAAGAACGG CAGTACCCTG 
GAAGACGTGC GGCTGGTGGA AGGACAGGGG GCAACCTGGT CCAACCTGGC GCTGACCACC 
GACGCCAACA TCTCGCTGGA GGCGTACCTG CGTCTGCACT CCACCGGCAC TCCGTCCGGC 
GGGCTGCCGC GTGAGGTGGT CTACAATGTG CCCATCGGGT GGATATTGGG CGGCGGCAAC 
TTCAGCAAGG AACAATATCA GGATACCTTT GCCAACCTGG ACAAGTGGTA TACCGGCTCT 
TCCAGCGAAG GGCATCTGGG GACGCACAGC ATTTCCAGCG ACTCCGTGCA CATCACCGCC 
ATGCAGACGG CGGTAACCAC CGGCTTCGGT TTTTTCCGCT CATGGCTGAG CGGCGACAAT 
CAGTGGAGTT CACTGTTCTT CAACTGGGGC GCCACCAACG TAGACCTTGC GCGAGGCTGG 
CTGGATACAG AGGGCAACTC CAGCTACGAT CTGCAATTCA AAACACGGGT GGCTAGCCAG 
AGCGGGAACA ACAAGGCATT CTTCGGCGGC ATGATGTTCC GTGCGCGCAA CAACGACCAG 
GGCGATGCGG ACTCCAACAA CGACGAACTT GAATGCTACG GTATTTCCTT CGTCCGCTTC 
AGGCAGTACC GCAGCCTGCT GAACAGCAAC TGGTACTGGC CAAACGACGT ACCCTCCACA 
CTGGTGCCCG GCTATGACGC AGGACCAGAC CCGGATACGG GCGGTCCAAT GTTTGGCACG 
GACGAATCGC AGAACGAAAT CGTCAACAAT TACTTTATCA TCTGGCTTAA CGCCAACAAG 
TATTCATGGC CCGGCATTCT GCTGTGGGAA CGCCGCAACG GTGCGTTCCG CTGGCTGGCC 
TACAAGAGGC TGGGACAGGC CTCGGGTATC GTCAACTACG GCAGTGGCCC CACCTACAGC 
CTGAAAGACT GGCCCTCACT GCTGGTCCGG CTGGTGGAAG GACAGGAACT GTCCTTTACC 
AACGGCGGCG GAACCAGCGC GGGAACCACC TTGCGCATCA ACTACGGCGA CGAAATAACC 
ACCGCCACCG GGGCCAAGGC GCGCGTCATC GGCCCCCCCA TCGTCACCAG CGGCGACTGG 
GCATCCGGAA CGGCGGCAGG CAAGCTGGTG CTGACAAACG TAGACACGGG CAGCAGCGGC 
AGTTTCGGCA ACGGGCAGAT CATCACGGTA GACAATGTGC AACATGCGCG AGTCGGCTCT 
GGGGGGTTGG GCAGCAAGGC CAACTACATT CGTGTGTATT ATTCTGATGC AAGCACCAAT 
ACCACTGGCG ATGCAGTGCC GTACAACCCT ACGGCACCGG GCGGCAATAC GACGTATACC 
TCCAGCCAGC GTCGCTCAAA CCAGCGCATC ACCACCAGCA GCGGCAAGCT AAGCTGGATA 
CCCGACGACT ACGAACAGTG GACTGCTGCG ACAGATTACT TTTCGCTGGT ACAGTGGGAC 
GATGTGAACA CCGCAGTTAC GGGCGTGACA ACGATGGGCG AGTTGCTGAA CGGAAACAGC 
CTGAGCAACA GCATAGTGCG CAGTACCAAC CTGTTGTCGC CCACGTACAA TGACAGCAGC 
CCGTCTTACT CGCCACCGGA AGCACTATCC ATCTTCACCA GCGGCCCCAC AGGTACGAAC 
TTTTACTTTG ACGACTTCGG GTTGCAGCTT GACCTGCGTG GCGGCAAGGG CTTTCTGCCG 
CCCATCCAGC AATAG 

 

Protein sequence

MNAKGFTLIE VTVVLVLAGL LAAVAGVGIV TGARSFVTAR EASDLAQEAQ LAMDRLTREI 
VELVDIPANS SSTLLVLRNV GAQGTAQFNR SIQYVANAQA IRIADGTGGA TNGDTLIDNV 
TAFSLTYWQE DTSTTSWAST NDARLLSAID VNFTLTAPGG TTRQFVNRIV PRNNENRGGA 
SPNSAPPSLA RYDVCFVATA AAGNGDHPVV VQLRQFRDRL LLPWSGGRAL VRAYYAVGPD 
MARVVAAHEP LRAATLAALT PVAALAGLAV HAPGWLAACV VLSALLVAVT GRALRRGSTA 
ARAAMDTAMG TARNAGQRGA VLLSAIVTIV AFSVLAATMV PMMTGSMMGE ISAVQGDQAY 
YLAESGFGAA GSMFLAAGDE QARKNLLETM DGSTYTFANN AGSFTLGVEP YWYEVTNNTG 
TTLTTRAYGT PPTLPTNTSG RIRAGTGSTF YAYSNISVSG DTVTFTLTST PSPLIASGTD 
IFFSARPSAS QTVTERGNLT LTASNAAAFP NVNGMFTIRD GATHTGRVAY VYRRKNGSTL 
EDVRLVEGQG ATWSNLALTT DANISLEAYL RLHSTGTPSG GLPREVVYNV PIGWILGGGN 
FSKEQYQDTF ANLDKWYTGS SSEGHLGTHS ISSDSVHITA MQTAVTTGFG FFRSWLSGDN 
QWSSLFFNWG ATNVDLARGW LDTEGNSSYD LQFKTRVASQ SGNNKAFFGG MMFRARNNDQ 
GDADSNNDEL ECYGISFVRF RQYRSLLNSN WYWPNDVPST LVPGYDAGPD PDTGGPMFGT 
DESQNEIVNN YFIIWLNANK YSWPGILLWE RRNGAFRWLA YKRLGQASGI VNYGSGPTYS 
LKDWPSLLVR LVEGQELSFT NGGGTSAGTT LRINYGDEIT TATGAKARVI GPPIVTSGDW 
ASGTAAGKLV LTNVDTGSSG SFGNGQIITV DNVQHARVGS GGLGSKANYI RVYYSDASTN 
TTGDAVPYNP TAPGGNTTYT SSQRRSNQRI TTSSGKLSWI PDDYEQWTAA TDYFSLVQWD 
DVNTAVTGVT TMGELLNGNS LSNSIVRSTN LLSPTYNDSS PSYSPPEALS IFTSGPTGTN 
FYFDDFGLQL DLRGGKGFLP PIQQ