| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0779 |
|---|
| Symbol | |
|---|
| ID | 7172667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 934164 |
|---|
| End bp | 936089 |
|---|
| Gene Length | 1926 bp |
|---|
| Protein Length | 641 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643539280 |
|---|
| Product | PBS lyase HEAT domain protein repeat-containing protein |
|---|
| Protein accession | YP_002435204 |
|---|
| Protein GI | 218885883 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1413] FOG: HEAT repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 0.0209009 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAC AGCAGATCAT CGAGCAACTC CAGGGCGACG ACGTCGAGGC AATCCGCGAG
GCGGCCTACG CCGCCGGGAA CCTTCGACTG GAAAGCGCCG TACCGCATCT GGTGGCGCGC
ATCCAGAGCC ACAACATCGG GGTGCAGGAA GCGGCCGACC GGGCCCTGCG CAAGATAGGC
GGGGTTGCCG CCGTGCATGG GGTGCTGCCC CTGTTGCGGT CGGACGATGC GCCCATCCGC
AACATCGCCA TGGACGTGCT GCGCGAGATC GGGGCCGACG ACTTCGATTC GCTGAAGCAG
TTGCTGCATG ACGACGACCC CGACATGCGC ATTTTCGCGT CCGACATCCT CGGCACTTCG
GAAAGCATCC TTGCGGTGCC TTCGCTGTGC GAGGCGCTGC TGCGCGACCC AGAGGTCAAC
GTGCGCTACC AGGCCGCCGT CAGCCTTGGC ACCCTGGCCT TCCCCGAGGC GGCGGACTGC
CTGAACAAGG CCATGATGGA CGAGGAGTGG GTGCAGTTCT CGGTCATCGA GGCGCTGACC
AAGATCCGGG CCGAATCGTC GGTCAACGCA CTGGTCAAGG CGCTGGATTC GGCCTCGGAC
CTGGTGGCGT CCATGATCGT GGACGCCCTT GGCGAGATGG GCAACATCAA GGCCGTGCCG
CTGCTGCTCA AACGCCTGGA CAAGTCGCCC GGGCCGCTGC GCAACAAGAT CGCCAAGGCC
ATCGTCAACG TGCTGGGCGG CAAGTCGCTG TCCCTGCTGG GCGAGAAGGA CAGGTTGCGC
CTGCGCGACT ACCTGCTGGC CGCCATGGAT GACGAGGACG AGGACGTGCA GAACGCCGCC
ATGCGCGGCC TTGCCAGCAT CGGCGGGGCA GAGGCGACGG AGGCGGTGCT GAAGGTGGCC
GTTGTGCTGG ACCCCGACCG CGACCACGAG CGTCTGGTGG CCTGCGTGCA GAGCCTGGCC
GACATCGGCT TCAACAGCGC GGTGGACCGC CACGTGCGCG GCGATGACGA GCACACCCTG
CTCATCCTCG TCGAGGCCAT CCGGGGCATG CCCAGCCGCC ACGGCATCGA CGTGCTGCGC
GGGGTGTTCT GGGACAAGCC GCGCGATGCC CAGCGGGCCA TGTCCACGGT GCTGGCCGAA
CGCTGCGACC CCAGCGACCG CGATTTCTTC ATCGACGTGC TGGACCGCCA CAACGACGCC
CACGTGCTGA AGGCGGCGCT GCACTACCTG GGCCGCCGGG CCAAGGCGGT GGAAGCGGGC
GACCGCATGC TGGCCCTGCT TGAACACCCC TACGACGACG TGAAGGAAGC CGCGCTGGAC
GCGTGCATCG CCCTGAACAA CCCCGCCATG AACGCCCGCT TCCGCGAATC GTTCCGCAGC
CCCGACCCGC TGCACCGCAT GATGGCCGTG TACGCCATGG GGCGCTTTGA CGTGGAGGAG
AACCTTGCCG AACTCACCGA GGCGCTGGAA GACGAAGTGC CCGACGTGCG CAAGGTGGCG
CTGGAGGCGG TGGCCAACGT GTGCCCCTTC AGCAGCAGCC GGCTGGAACT GGTGGTGCCC
CGCCTGCATG ATGAAAACCG CGAGGTTCGC CTGGCCCTCA TAGAACTGCT GGGCAACTGC
GGCGAAGGCA ACGTCTTTCC CTACCTGATC CAGGCCCTGG ACGACCCGGA CGACTGGGTG
CGGGTGCGGG CCATCGAGGC GCTGGGTACG CTGAAGGACG CCGAGGCCGT GCCGCAACTG
GTGGCCCTGA CCGAAAGCGC CGGGCACTTG GTGCTGCTGA AGGTGGTGGA GGCGCTGGGC
GCCATCGGGG GCAACGTCGC GTTCCGGGCG TTGCTGCATC TGATGGAATC GGATGATCCC
GAGGTCCAGC AGGCCGCCGA GACTGCGGCC GCCCGCATCC ACGAAGAACA AGGAGTGGAT
GACTGA
|
|---|
| Protein sequence | MSEQQIIEQL QGDDVEAIRE AAYAAGNLRL ESAVPHLVAR IQSHNIGVQE AADRALRKIG
GVAAVHGVLP LLRSDDAPIR NIAMDVLREI GADDFDSLKQ LLHDDDPDMR IFASDILGTS
ESILAVPSLC EALLRDPEVN VRYQAAVSLG TLAFPEAADC LNKAMMDEEW VQFSVIEALT
KIRAESSVNA LVKALDSASD LVASMIVDAL GEMGNIKAVP LLLKRLDKSP GPLRNKIAKA
IVNVLGGKSL SLLGEKDRLR LRDYLLAAMD DEDEDVQNAA MRGLASIGGA EATEAVLKVA
VVLDPDRDHE RLVACVQSLA DIGFNSAVDR HVRGDDEHTL LILVEAIRGM PSRHGIDVLR
GVFWDKPRDA QRAMSTVLAE RCDPSDRDFF IDVLDRHNDA HVLKAALHYL GRRAKAVEAG
DRMLALLEHP YDDVKEAALD ACIALNNPAM NARFRESFRS PDPLHRMMAV YAMGRFDVEE
NLAELTEALE DEVPDVRKVA LEAVANVCPF SSSRLELVVP RLHDENREVR LALIELLGNC
GEGNVFPYLI QALDDPDDWV RVRAIEALGT LKDAEAVPQL VALTESAGHL VLLKVVEALG
AIGGNVAFRA LLHLMESDDP EVQQAAETAA ARIHEEQGVD D
|
|---|
| |