| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0600 |
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| Symbol | |
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| ID | 7172487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 712037 |
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| End bp | 714088 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643539100 |
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| Product | degV family protein |
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| Protein accession | YP_002435025 |
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| Protein GI | 218885704 |
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| COG category | [R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1307] Uncharacterized protein conserved in bacteria
[COG1461] Predicted kinase related to dihydroxyacetone kinase |
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| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.000100467 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCAGCAAC GGCAGACCCC GCCCACGGAC CAGCCCCTGA GCCAGATCCC GGACCATGGC
ATGGACCAGG CTTCGGACCA GACCGTGGAC CAGCTCACGG ACCAGGCTTC GGACCAGGCC
CCGGGCCATC CCCAGGCCGA ATCCGCCCCC GAAGGCCAAG CACAGCCATC ACGCATCAGC
TACCTCGACG GCATCCGCTT CCGCCGGGTG GTGCGCGCCG CCGCGCGCCG CCTCATCGAA
AAGCACGGCC ATCTCAACGC CATCAACGTG TTTCCCGTGC CGGACGGCGA CACGGGCAGC
AACATGGCGG GCACCATGAA GTCCATCGTG GCCTCCACCT CGGCCACGCC GGAAAGTTCG
ATCGGTCGCA TGAGTTCCAT CGTGGCCGAA TCGGCGCTGA TGGGCGCGCG GGGCAATTCC
GGGGTCATCC TGGCCCAGTT TCTGGCCGGG TTTTCCGAAG GGGTGAAGGA TCTTTCGCGC
GTCAGCCCCC GCGACTTCGC GGAAGCCGCA TCGCTGGCCG CGCGCCGTGC CGTGGAGGCC
ATTGCCCACC CCAAGGAGGG CACCATCCTC ACGGTCATTC GCGACTGGGC CGAACACCTG
CGCGAAAACT GCCATTCCTA CAAGGATTTC CATCACCTGC TGCACGATTC GCTGGACCGT
GCCCGCCAGT CGGTGCAGGA AACGCGCGAA AAGCTGGCCG CGCTCAAGGC CGCCGACGTC
GTCGATGCCG GGGGCCTTGG CTTCGTGTAC CTGCTTGAAG GCATTGCCGA ATTCACCGAG
CGCGGCACCA TCAACCGGCG CGACAAGACA GACGGACAGT CGGAAACCGC CGGTACGGCG
GGTACGCCCG GCGGGGCCGA CAACGCCACC TTGGGCGAGG CCCAGGAACG CGTGGCCGTG
GAAGAGCTGA CCTACGGCTA CTGCACCGAG TGCCTGATCC GCAGCGGGGC GACCAGCCCC
GTCGACCGCG AGGAATTGCG CGTCCGGCTG GAGGAACTGG GCGATTCCAT CGTGGTGGCG
GGCGCCGGGG CCGTCACCCG CGTCCATGTG CATACCGACA CGCCGGACAC CGTGTTCGCC
ATCGCCGCCG AATACGGCGA GGTATCGCAC CACAAGGCAG AGGACATGCT GCGCCAGCAC
CGCGACCTGC TGGCCGCCAT GGCGGGGGGG CACCCCCAGG CCGCGCCCGC GCCCACCGGC
ACCGCCGTGG TCACCGATTC CACCTGCGAC CTGCCGCGCG AGCTGCTGGA CCAGTACTCC
ATCCGCACCG TGCCCCTGCG TTTGTTTCTG GACGACGAGG AGTTCGTGGA CAAGGTGAGC
ATCTCGGCGG ACGAGTTCAA CCGCCGCCTG CCCTCGTCCC GTTCCGCGCG CACCTCGCAG
CCTGCGCCCG CCGATTTCCG CACCGTGTAC GAAGAGGTGT TGGCCACCCA TGCCCAGGTG
GCCTCGCTGC ACGTGACGGC CATGTACAGC GGCACCCACC AGTCCGCCGC CACCGTGGCG
CGCATGGTTT CGCCGCACAT CGCCGCCGTG GACTGCCGCA CCCTGACCGT GGGCCTTGGC
CTTGTGGTGC TGGAAGCGGC CCGCCGCGCG CAAACCGGCA TGGATGCAGC CGAGGTGGCC
CGCCTTGCCG CGAGGGACGC GGACAACCTG CACGTGTACG TTTCCATGGA AACCCTGGAC
TTTGCCGTGC GCGGAGGCCG CATGAGCCGG GGCACCGGCA TGGTGGCCAA GCTGCTGCAC
ATCAAGCCGG TACTGTGCTT CGACCCGCGC AAGGGCGGCA AGGTGGACGT GGCGGCCAAG
GGCATCGGGC CGCGCCGCGC CGGTGAAAAG CTGTTCGCCC TGCTGGAGCG GGCGGTGGCC
AACATGGACA ATCCGCGCTT TGCCGTGGCC CACGTGGGCG CCCCGGACAC CGCCGCACGC
TACGCGAAGG AACTGGAAGC CCGTTTCGGC GTGGCCCCGC TGTACGTGAT GCCCGCATCG
CCGGTGCTGG GCTGCCACAG CGGCCCCGGC GCCTGCGCGG TGGCCCTGCT GGGTGACCCC
AAGGACGGGT AA
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| Protein sequence | MQQRQTPPTD QPLSQIPDHG MDQASDQTVD QLTDQASDQA PGHPQAESAP EGQAQPSRIS
YLDGIRFRRV VRAAARRLIE KHGHLNAINV FPVPDGDTGS NMAGTMKSIV ASTSATPESS
IGRMSSIVAE SALMGARGNS GVILAQFLAG FSEGVKDLSR VSPRDFAEAA SLAARRAVEA
IAHPKEGTIL TVIRDWAEHL RENCHSYKDF HHLLHDSLDR ARQSVQETRE KLAALKAADV
VDAGGLGFVY LLEGIAEFTE RGTINRRDKT DGQSETAGTA GTPGGADNAT LGEAQERVAV
EELTYGYCTE CLIRSGATSP VDREELRVRL EELGDSIVVA GAGAVTRVHV HTDTPDTVFA
IAAEYGEVSH HKAEDMLRQH RDLLAAMAGG HPQAAPAPTG TAVVTDSTCD LPRELLDQYS
IRTVPLRLFL DDEEFVDKVS ISADEFNRRL PSSRSARTSQ PAPADFRTVY EEVLATHAQV
ASLHVTAMYS GTHQSAATVA RMVSPHIAAV DCRTLTVGLG LVVLEAARRA QTGMDAAEVA
RLAARDADNL HVYVSMETLD FAVRGGRMSR GTGMVAKLLH IKPVLCFDPR KGGKVDVAAK
GIGPRRAGEK LFALLERAVA NMDNPRFAVA HVGAPDTAAR YAKELEARFG VAPLYVMPAS
PVLGCHSGPG ACAVALLGDP KDG
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