| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0274 |
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| Symbol | |
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| ID | 7172156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 313455 |
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| End bp | 314408 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643538770 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_002434699 |
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| Protein GI | 218885378 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 0.196378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTCA ACAGGCGTGA TTTCGTCAAA TTGTGCACAG GTACGGTTGC AGGGTTCGGG
ATATCCCAGA TGTTCCACCC CGCCGTCTGT GAAGCCATTT CCGGTTCGCT GAACGGCGAA
CGGCCCCCGG TGCTCTGGCT GCAGGGCCAG GGCTGTACCG GTTGTTCGGT GTCGCTGCTG
AACTCGGTGC ACCCCACCAT CGCCGATGTG CTGCTGAAGG TCATCAGCCT GGAGTTCCAC
CCCACCGTCA TGGCGTGGGA AGGCGAACCC GCCATGGAAC ACATGATGAA GATCGCGGAA
CAGTACAAGG GCAAGTACTT CGTGGTGGTT GAAGGGGCGG TGCCCACCGA GGCCGACGGC
AAGTACTGCA TCATCGGCGA AGCGCACCAC AAGGAAATCT CCATGGTTGA CGCCATGAAG
AGCGTTGCCG CCAATGCCGC CGCCGTGCTG GCCGTGGGAA CCTGCGCGGC CTATGGCGGC
ATTCCCGCCG CCCAGGGCAG CGAAACCGGC GCCAAGTCGG TGTCGCAGTT CTTCAAGGAC
AACGGCATCG CCACCCCGGT GGTGAACATT CCCGGCTGCC CGCCCCACCC CGACTGGATC
GTGGGCACCG TAGTGGTGGC GCTGAACGCC ATCAAGGCCA AGGGCCTGGC CGCCGGCCTT
GGCGACGTGG TCAAGCTGCT CGACGCCGAC GGCCGCCCCA CCCCCTTCTA TGGCCGCAAC
GTGCATGAAA ACTGTCCCTA CCTTGAAGCG TACGACGCCG GGAAGATGTG CGAAACCTTC
ACCAAGAAGG AAGGCTGCCG CTACGACCTC GGCTGCAAGG GCCCCATGTC CATGTGCGAC
AGCTTCGAGC GCAAGTGGAA CGGCGGCGTT AACTGGTGCA TCTCCAACGC GGTGTGCATC
GGCTGCGTCG AACCCGACTT CCCCGACGGC AAGTCTCCCT TCTACTCGGC CTAG
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| Protein sequence | MSLNRRDFVK LCTGTVAGFG ISQMFHPAVC EAISGSLNGE RPPVLWLQGQ GCTGCSVSLL
NSVHPTIADV LLKVISLEFH PTVMAWEGEP AMEHMMKIAE QYKGKYFVVV EGAVPTEADG
KYCIIGEAHH KEISMVDAMK SVAANAAAVL AVGTCAAYGG IPAAQGSETG AKSVSQFFKD
NGIATPVVNI PGCPPHPDWI VGTVVVALNA IKAKGLAAGL GDVVKLLDAD GRPTPFYGRN
VHENCPYLEA YDAGKMCETF TKKEGCRYDL GCKGPMSMCD SFERKWNGGV NWCISNAVCI
GCVEPDFPDG KSPFYSA
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