Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2538 |
Symbol | |
ID | 7384809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 2700372 |
End bp | 2701133 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643655846 |
Product | hypothetical protein |
Protein accession | YP_002553973 |
Protein GI | 222111709 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4726] Tfp pilus assembly protein PilX |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCAAC GCATGCCCCC TTCTTCACGC CACCCACGCC ATCCACGCGG CACCCACCGC CAGGGCGGCA TCGCCCTGTT CGTCGTCCTC GTCTTCGTCA TGCTCTCCAT GTTGCTGGCG CTATGGGCAT CACGCACCTC GCTGTTCAAC GAAATGGTGG TGGGCAACGA TGCCGACTAC CAGCGCGCCA CCGAAGCCGC CCAGGCCCTG CTGCAAGACG CCGAGCTGGA CATCCGCGGC GAGCGCGCAG ATGGCGGCAT GTGCACCGGG ACGGCCCCCG TCTGCCGCCA GGGCAGCGTC GCCACGATGC CTGTGGAAGC GAAGGACGTC GCCAACCTGC TCGCCGACCT GGAAACCGTC AGCACCGGCC CCCGCTGCAA GAACGGCCTG TGCCTCAAGC GCACCGGCAA TCAGGACTTC TGGAACGAAA GCGACGCCAA TACGGGGCTG GCCGCCATGC AAGCCGTTGG CACGCGCTAC GGCACCTACA CCGGCGCCAA AGTGGGTGAC GACGACGCGC CCGCCAATCC CATCCTGCGC AACACCGCCG CCGGACAAGG CGGCTGGTAC TGGATCGAGG TGCTGCCCTA CACCCCCGAC GCGGCCAATG CCAGCCTCAT CGCGGGCGGC AATGCCAACT ACCTGGCCGT CAACGTCCAG CCCAACGTGA TCTACCGCGT CACCGCCATG GCCCAGGGCC GCAAGGACAG CACGCGGGTC GTCCTGCAGC AAACCTATGT GCGCCACAGG CTCAAGGACT GA
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Protein sequence | MPQRMPPSSR HPRHPRGTHR QGGIALFVVL VFVMLSMLLA LWASRTSLFN EMVVGNDADY QRATEAAQAL LQDAELDIRG ERADGGMCTG TAPVCRQGSV ATMPVEAKDV ANLLADLETV STGPRCKNGL CLKRTGNQDF WNESDANTGL AAMQAVGTRY GTYTGAKVGD DDAPANPILR NTAAGQGGWY WIEVLPYTPD AANASLIAGG NANYLAVNVQ PNVIYRVTAM AQGRKDSTRV VLQQTYVRHR LKD
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