| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1293 |
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| Symbol | |
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| ID | 7382382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1349155 |
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| End bp | 1351128 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643654612 |
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| Product | hypothetical protein |
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| Protein accession | YP_002552758 |
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| Protein GI | 222110494 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACC GTCGCGACGA CGATTTCCGC ATCCGCCCCA GCGCCCCGAA GAACCGGGGC
CAGGGCTTCG TCTCCAAGGT GCTCAAGCAG GCGGGCAAGG CCAACGGCGG CAAGTCCTCG
GTGCGCCGTG CGGCATCGGC GCGTGGCACC GGCCAGCGGC CCGGTTCGCG CCTCGGGCGC
GGCCACACGG CGGCGCGCTT CGCGGGGGCG AAGCTCACGC CTATGTCGCG GCGCGTGACC
ATCAAGACGC TGCTGGTCAA CCAGCGCCAG GCCAGCCCGC AGTCGCTCGC CAAGCACCTG
CGCTACATCG AGCGCGACGG CGTGGGCCGC GACGGCGAGC CGGGTCAAGC CTACGGGCCG
CAGACCGATG CGGCCGCCCT CGATGCCTTC AAGGAACGCT GCACCGACGA CCGACACCAT
TTCCGCTTCA TCCTCTCGCC CGAGGATGGG GCCGAGCTGG AAGACCTGCG CACCTACACG
CGGCACCTCA TGGGCCGCAT GGAGGCCGAC CTGGGCACGG GCCTCGATTG GGTGGCCGTC
AATCACTGGA ACACGGACAA CCCGCACACG CACATCGTCG TGCGCGGGCG CGACGACACC
GGCAAAGACC TCATCATCGC GGGCGACTAC ATCGCCCACG GCTTCCGCCA TCGGGCCGCC
GAACTGGCGA CCGAATGGCT GGGACCGCGC ACTGAGCTGG AGATCCAGCA GACCTTGCAG
CGCGAGGTGG AGCAGGAGCG GTGGACGAGC CTGGATCGCA CCCTGCAACG CGAGGCCGGC
GAGGACGGCC GAGTGCAGAT CGAACGCTTC AACGAACCGA GATTGCAACG CCAGCGCCTG
CTGCTGATCG GCCGGCTGCA ACGCTTGCAG CGCCTGGGCC TGGCCGACGA GATGCAGCCG
GGCACCTGGG CCGTCCATGC CGATGCCGAG AAGACCCTGC GCACCCTGGG CGAGCGTGGC
GACATCATCC GAACCATGCA GCGTGCCATG CGCGGCGAGC CGCGCGAGCT GGCGGTATTC
GAGCCGGGTG AAGATGGCCG CACGGTCGTC GGGCGCGTCG CCGCGAAAGG ACTGGCCGAC
GAGCTGCGCG ACCGGGGCTA TCTGGTCATC GACGGCGTGG ACGGCAAGGC CCACTACGTC
GCGCTGAATG CCCGTCATGA GCTGGCGAAC TATCCGACCG GCGCTGTGGT GGAGGTGAAG
GGTTCGGCCG ACGTGCGCGC AGCAGACAAG AACATCGCCG CGCAGGCGAG CGATGGCCTG
TACCGCACTG ACCATCACCT GGCGATTGAG CAAGGCCGGG CTAAGCCTGG CCGCGATCCG
CAGGAAGTCA TCGCGGCCCA TGTCCGTCGA CTCGAAGCCC TGCGCCGGGC CGGTATCGTG
GAGCGTGTCG CCGAAGGGCT ATGGAAGGTG CCCGGTGACC TGCCCGAACA GGGCCGCCGC
TATGACGCGC AGCGCCTGGG CGGTGTGGCC GTGGAGCTGA AATCGCACCT GCCCATCGAG
CGGCAGGCCC GCGTGATCGG AGCCACCTGG CTCGACCAGC AGCTGATCGG TGGTGGCAGG
GGGCTGGGCG ATCTGGGCTT TGGTGGCGAC GCCAAGCAGG CCATGCAGCA GCGCGCCGAC
TTCCTCGAAG AACAGGGACT GGCCCAGCGG CGCGGGCAGC GCGTGATTCT TGCCCGCAAC
CTGCTCGACA CGTTGCGCAC CCGCGAACTG GCGCAGGCTG CCAAGGACAT TGCCGCCGAA
ACCGGCTTGC AGCATCGCAC TGTGGCCGAT GGCCAGCGCG TGACCGGCAT CTACCGGCGC
AGCGTCATGC TCGCCAGTGG GCACTACGCC ATGCTTGATG ACGGCATGGG GTTCAGCCTG
GTGCCTTGGA AGCCGGTGAT AGAGCAGCGA CTGGGGCAGC AGATCGCGGC GACTATGCGC
GGCGGCGTTG TGTCGTGGGA TGTGGTGCGG GGACGTGGGA TGTCGATCGG CTGA
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| Protein sequence | MTDRRDDDFR IRPSAPKNRG QGFVSKVLKQ AGKANGGKSS VRRAASARGT GQRPGSRLGR
GHTAARFAGA KLTPMSRRVT IKTLLVNQRQ ASPQSLAKHL RYIERDGVGR DGEPGQAYGP
QTDAAALDAF KERCTDDRHH FRFILSPEDG AELEDLRTYT RHLMGRMEAD LGTGLDWVAV
NHWNTDNPHT HIVVRGRDDT GKDLIIAGDY IAHGFRHRAA ELATEWLGPR TELEIQQTLQ
REVEQERWTS LDRTLQREAG EDGRVQIERF NEPRLQRQRL LLIGRLQRLQ RLGLADEMQP
GTWAVHADAE KTLRTLGERG DIIRTMQRAM RGEPRELAVF EPGEDGRTVV GRVAAKGLAD
ELRDRGYLVI DGVDGKAHYV ALNARHELAN YPTGAVVEVK GSADVRAADK NIAAQASDGL
YRTDHHLAIE QGRAKPGRDP QEVIAAHVRR LEALRRAGIV ERVAEGLWKV PGDLPEQGRR
YDAQRLGGVA VELKSHLPIE RQARVIGATW LDQQLIGGGR GLGDLGFGGD AKQAMQQRAD
FLEEQGLAQR RGQRVILARN LLDTLRTREL AQAAKDIAAE TGLQHRTVAD GQRVTGIYRR
SVMLASGHYA MLDDGMGFSL VPWKPVIEQR LGQQIAATMR GGVVSWDVVR GRGMSIG
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