| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0500 |
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| Symbol | |
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| ID | 7382791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 518126 |
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| End bp | 519919 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643653812 |
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| Product | YhhN family protein |
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| Protein accession | YP_002551981 |
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| Protein GI | 222109717 |
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| COG category | [I] Lipid transport and metabolism
[S] Function unknown |
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| COG ID | [COG3000] Sterol desaturase
[COG3714] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.602107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGGCA GCCAGATCAT CGTCCTCGTC ACCCCGGTGT TCCTCGCCCT CATGGCGCTG
GAATGGGCCA TCGGCCGTTG GCGCGGGCGG CCCGCGTTGC GGCTGGCCGA TGCGGTGAGC
AGCGTCAGCC TGGGCATGCT CAGCCAGACC AGCGCGGTGT TCACCGTGCT GCTGCGCGTG
GGGCTGTACA CGCTGGCCTA TGAGCACCTG GCGCTGTGGC GCAGCGAGGC GTTCTGGACC
ACCTGGTACG GCTGGCTCAT CGCGCTGGTG TTCTACGACT TCTGCTACTA CTGGCTGCAC
CGCATGGGGC ACGAAGTGGC CGTGCTGTGG GCCGCGCATG CGGTGCACCA CCAGAGCCAG
GACTACAACC TGTCCACCGC GCTGCGCCAG ACCAGTTCCG GCGCGGTCCT GGGCTGGGTG
TTCTACCTGC CGATGGCGCT GGCGGGCGTG CCGCCGCTGG TGTTCGTGGT GGTGGGGCTG
GTCGACCTGC TGTACCAATT TTGGGTGCAT ACCGAGCAGG TGGGGCGGCT GGGCTGGTTC
GACCGCTGGT TCTGCAGCCC CAGCAACCAC CGCGTGCACC ACGCCGTGAA CGACAGCTAC
CTGGACAAAA ACTACGGCGG CATCCTGATC GTGTGGGACC GGCTGTTCGG TACCTTCAAG
GACGAGGACC CCCGGGAGAA ATGCGTGTAC GGCACGCGCG GCCTGCTCAA CAGCTGGGAC
CCGCTCTGGG CCAACGCCCA GGTGTATGCG GGCCTGCTGC ACGACAGCTG GCACGCCCGC
CGCTGGGCGG ACAAGCTGCG CGTGTGGCTG AAAGCCCCCG GCTGGCGCCC CGCCGACGTG
GCGCAGCACT TTCCCAAGCC GGCCTTCAAC TTCCACGACA TGCCCCTGTT CGACCCGCCC
CTGTCCGCGC CGCTGCGTTG GTTTGCCGGC GTGCAGTTCG TGCTGCTGCT GGCGGGCGTG
GCGGCATTCC TGTGGCAGGC CGACAGCGCA CCGCTGGCGA CCAACGCCGT GTGGTTCGCT
ACGCTGCTGG CCTGCCAGTG GGCCCTGGGC GCGGCCATGC AGGGGCGCAT TGGCATGGGG
TTGGCGCTGA TGATCGAAGC CGGGGCGCTG GCCACGGCGA CCAGCGCGCT GGGGTTCACG
GCGTGGCACC TGCTGTTCAA GCCGCTGACC ATGGCGATTG CTATTGTTTA TGTAGCTAAT
CACGCTTATC CAATGAGCGT TACAGGCCGT TTTGGCTTGC ACCGCTCATT CTGGCTGCTG
CTGAGCGCGC TACTGGGTTC GCTGGCGGGC GACGTGTTCC TGATGCTGTC AGAGCACCTG
TTCATTCCCG GGCTGGTGAG CTTCCTGCTG GCGCACCTGT GCTACATCGC GCTGTTCAAG
CAGGGCGCGG GTTGGTTCGG CCACCGCGGA GCACTCGTGG GTACGCTAGC GCTGGGCATC
GGCATGTACG CCTTCCTGTG GCACGGCGGA TTGCCGGCCG CGCTGCGGGT GCCGGTGGCC
GTGTATGTGG TGGTGATCGC GCTGATGGCG GCGCAGGCCT GGGGGCGCCA CGCGGCGCTG
CGCGAGCGCT CGTCGCTTGC GGTGGCGCTG GGCGCGTGCT GCTTCATGCT CAGCGATTCA
CTGCTGGCCA CCAACCGCTT CGTGCAGCCG CTGCCCTTGT CGCAGCTGTG GGTGCTGGCC
ACCTACTATG CGGCCCAGGT GCTCATCGTG AGCGGGATGG TCACAGCGCT GACCCGCGGC
GCGGCGCACC AAGCCGACGC GCGGACGCAG CCGCTCACCC CCCACGCGGC TTGA
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| Protein sequence | MSGSQIIVLV TPVFLALMAL EWAIGRWRGR PALRLADAVS SVSLGMLSQT SAVFTVLLRV
GLYTLAYEHL ALWRSEAFWT TWYGWLIALV FYDFCYYWLH RMGHEVAVLW AAHAVHHQSQ
DYNLSTALRQ TSSGAVLGWV FYLPMALAGV PPLVFVVVGL VDLLYQFWVH TEQVGRLGWF
DRWFCSPSNH RVHHAVNDSY LDKNYGGILI VWDRLFGTFK DEDPREKCVY GTRGLLNSWD
PLWANAQVYA GLLHDSWHAR RWADKLRVWL KAPGWRPADV AQHFPKPAFN FHDMPLFDPP
LSAPLRWFAG VQFVLLLAGV AAFLWQADSA PLATNAVWFA TLLACQWALG AAMQGRIGMG
LALMIEAGAL ATATSALGFT AWHLLFKPLT MAIAIVYVAN HAYPMSVTGR FGLHRSFWLL
LSALLGSLAG DVFLMLSEHL FIPGLVSFLL AHLCYIALFK QGAGWFGHRG ALVGTLALGI
GMYAFLWHGG LPAALRVPVA VYVVVIALMA AQAWGRHAAL RERSSLAVAL GACCFMLSDS
LLATNRFVQP LPLSQLWVLA TYYAAQVLIV SGMVTALTRG AAHQADARTQ PLTPHAA
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