Gene Dtox_2874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2874 
Symbol 
ID8429863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3056239 
End bp3056949 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content52% 
IMG OID645035138 
ProductABC transporter related 
Protein accessionYP_003192262 
Protein GI258516040 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.675054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAA AAGTATTGAT GAAACTTAAC CGGGTAACCA GAACTTATGT TATGGGTGAG 
GTCACTGTCG AGGCCTTAAA GGAGACCTCC CTGGAGTTAT ACGAGGGCGA ATTAATGGTT
ATTCTGGGTC CCAGCGGTTC CGGTAAAAGT ACCCTGCTGA ACATTATGGG AGGTATGGAT
CTGGCTTCCG GCGGGCAGGT GTATTTCGGG CAGGAGGATT TAACCCGGGC CGGCGATAAA
CAGTTAACCA GGTACAGGCG TTACGAACTG GGTTTCGTCT TTCAATTTTA CAATCTCATT
CCTGATTTGA CAGCCAGAGA AAACGTTGAA CTGTCCGCTA ACCTGGTGGC TAACCCTCTG
CCTGTGGAGG AAGTGCTAAG GGATGTGGGA TTGGGAAGCA GGAGCGATCA TTTTCCCTCC
CAGCTCAGCG GAGGTGAGCA GCAGAGAGTG GCCATCGCCC GGGCGGCGGT GAAAAATCCA
CGCCTGCTGC TCTGCGATGA ACCAACCGGT GCCCTGGACC ACCAAACCGG CAGACTTATC
CTTGCTTTAC TCGCTAAAAT TAACCGGGAG CGGGGCAGCA CGGTAGTTAT AGTTACCCAC
AATACCCCTA TCAGCGCCAT GGCTCACCGG GTTGTTCGCA TGAGCAGCGG GGCTGTTGTA
GACATTTCAG AAAACCGGTT TCCTTTGCCG CCCGAAAGGA TTGAATGGTA A
 
Protein sequence
MTKKVLMKLN RVTRTYVMGE VTVEALKETS LELYEGELMV ILGPSGSGKS TLLNIMGGMD 
LASGGQVYFG QEDLTRAGDK QLTRYRRYEL GFVFQFYNLI PDLTARENVE LSANLVANPL
PVEEVLRDVG LGSRSDHFPS QLSGGEQQRV AIARAAVKNP RLLLCDEPTG ALDHQTGRLI
LALLAKINRE RGSTVVIVTH NTPISAMAHR VVRMSSGAVV DISENRFPLP PERIEW