Gene Dtox_2839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2839 
Symbol 
ID8429828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2997472 
End bp2998473 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content38% 
IMG OID645035103 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003192227 
Protein GI258516005 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG CGTTAATTAC AGGAATAAGT GGTCAGGACG GTTCATATCT TGCTGAATTA 
TTGTTGGAAA AAGGTTATGA GGTTCATGGT ATTATACGGC ACATATCTTT CGAGGATACC
GGATATAGGC TAAGTAATAT TGCTCATATA CAGGATAAAA TTTTTTTACA CGGTGCGTCC
CTGGAAAACC AGTTGTCGCT TTACAAGGTG GTTAAGGAAG TTCAACCGGA TGAGTGCTAT
CATTTAGCGG CAAGGAGTTT TGTTAGTTAT GGTTTGGATG AATCCTCCAT TCTAACGACT
AATTTCAATG GAACACATCA TTTGCTGGAA GCAATTTGCG AAATAGTCCC ATCATGCCGT
GTTTATTTTG CCGGATCCAG TGAGATGTTT GGTTATGCGG GTACATCCCC GCAAAACGAG
TTTACACCTT TTTATCCTCG TTCGATGTAT GGTATTTCTA AACTGGCAGG TTATCATTTA
GTTAATATAT ACCGGAAAAG ATATGGAATC TTTATTTGTA CCGGAATTTT GTATAATCAT
GAATCTCCCC GGCGAGGATT TGAGTTTGTT ACAAGGAAAA TTACGTCAAC TGCCGCAAAA
ATAAAAATGG GTTTTAAAAT AAAGCTTATT TTGGGGAATT TGGAGGCCAG ACGTGATTGG
GGCTATGCTC CTGATTATGT TCGAGCAATG TGGATGATGC TGCAGCAAGA TACTCCTGAT
GATTATATTG TTGCGACCGG CAGAACCAAT TCAGTAAAAG ATTTTGTTGA TATTACCTTT
AAAATGTTGA ATTTGAATTA TAAGGACTAT GTAGTGACTG ATCAGAGGTT TTATAGATCG
GGTGAAGAAG TACCTTTATG TGGTGACAGC CAAAAAATTA GAAGTAGATT GGGTTGGAAA
ACAACGAAGC TGCTGACAGA GATTATCGAA GAAATGGTTC AGGAGGATTT AAAAGCAGAA
GGTTTAAGGT GTGATTATGG TTCGCGTATT ATACGATCAT AG
 
Protein sequence
MKKALITGIS GQDGSYLAEL LLEKGYEVHG IIRHISFEDT GYRLSNIAHI QDKIFLHGAS 
LENQLSLYKV VKEVQPDECY HLAARSFVSY GLDESSILTT NFNGTHHLLE AICEIVPSCR
VYFAGSSEMF GYAGTSPQNE FTPFYPRSMY GISKLAGYHL VNIYRKRYGI FICTGILYNH
ESPRRGFEFV TRKITSTAAK IKMGFKIKLI LGNLEARRDW GYAPDYVRAM WMMLQQDTPD
DYIVATGRTN SVKDFVDITF KMLNLNYKDY VVTDQRFYRS GEEVPLCGDS QKIRSRLGWK
TTKLLTEIIE EMVQEDLKAE GLRCDYGSRI IRS