Gene Dtox_2254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2254 
Symbol 
ID8429237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2426157 
End bp2426666 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content38% 
IMG OID645034561 
ProductHelix-turn-helix type 11 domain protein 
Protein accessionYP_003191691 
Protein GI258515469 
COG category[R] General function prediction only 
COG ID[COG1827] Predicted small molecule binding protein (contains 3H domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00454086 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATCGGA AAGAAAATAT CCTGCAGATT TTACAATCTT CCAGTAAGCC GGTTACTGGC 
AATGAAATGG CAAAAATATT AGGAGTTAGC CGCCAGGTAG TTGTTCAGGA TGTCGCCATT
CTGCGAGCTC AGGGTATACA TATAATGGCA ACGCCACAAG GTTATCTTTT AATAAATCAT
GGTGCGGAGA ATTCCAAACG AGCTGTACTG GCAGTAAAAC ATATGCCCGA GGAAACTGAA
GAGGAACTCA ATATACTGGT GGATCACAAC ATTAGAATTA TTGATGTTAT TATTGATCAT
CAGATTTATG GTGAATTGCG TGGATTTTTA ATGCTGAATA CACGCGCAGA TGTTAAAAAA
TTCATAGAGA ATATTAAAGC AGAAAAGGCC ACTCTTCTTT CATCACTTAC AGGCGGTGTA
CACCTGCATA CCGTTGAATA TGAAGATGAT TTGAATTTAC AAAAGGCCAA AGAGAAATTA
TCGCAATACA ATTTTTTGGC CAAAAGTTAA
 
Protein sequence
MDRKENILQI LQSSSKPVTG NEMAKILGVS RQVVVQDVAI LRAQGIHIMA TPQGYLLINH 
GAENSKRAVL AVKHMPEETE EELNILVDHN IRIIDVIIDH QIYGELRGFL MLNTRADVKK
FIENIKAEKA TLLSSLTGGV HLHTVEYEDD LNLQKAKEKL SQYNFLAKS