Gene Dtox_2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2062 
Symbol 
ID8429044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2241236 
End bp2242219 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content51% 
IMG OID645034383 
ProductTransketolase domain protein 
Protein accessionYP_003191514 
Protein GI258515292 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.258257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGA TTACCATGGG TCAAGCCGTT CAGCAGGCCC TTTTTGAAGA GATGCGCAGG 
GATCCTGATG TTTTTATAGC GGGTGAGGGT GTGGGCCAAT CCATTCATGA GTCACCGATA
ATGCCCACTT ATGGGCTTTT AAAGGAATTT GGGCCGAGTA GGGTGAAGGA CACCCCGGTT
TCCGAGGCTG CCATTGCCGG TCTGGCGGTA GGCTCTTCAG TTATGGGTTT GCGGCCGGTT
GTGGAAATTA TGTTTAATCC GTTTATTACC ATTGCCTCTG ACCAGATCGT CAACCATGCC
GCTAAATTAC GATACCTTTC CGGTGGCAAA AGTACTTTTC CTATGGTAGT GCGGGTTAAG
ACCGGTGCCG GGTTTGGCGC TGGTTGCCAA CACTCCCATA ACCTTGAGGC GTGGGTAGCC
CATTGCCCCG GGTTAAAGGT TGTCATGCCC GGCACCCCGG CGGATGCCAA AGGGCTTTTG
AAGTCAGCCA TTCGAGATGA TAACCCTGTT ATATTTATAG AGGACATGAT GCTTTATTTT
GCTCCCGGGC AGGTACCGAA AGAGGACTAC AGCATTCCCA TTGGTGTAGC TGATATTAAG
AAGCAGGGTA AGGATGTTAC GGTGGTAACC TGGTCCAAGA TGCTGGGCGT GGCCTTCAAA
GCAGCTACGG AATTGAGTAA AGAAGGAATT GAGATTGAAA TCGTAGACCT GAGGACACTG
GCTCCTCTGG ATAAGGAAAC GATTCTTCAG TCGGTGCGTA AAACGGGGCG TCTGGTGATA
TTGCACGAGG CTACCCGCAC CGGCGGTTTT GGTGGAGAAA TTGCCGCACT GGTGGCAGAA
GAGGCTTTCG GAGATCTGAA AGCACCGATA AAGAGGGTGG CGGCTCCGGA TATACCTGTT
CCCTTTAGCC CCCCTCTGGA ACAGTTTTAT ATTCCAAATG AAGGCCAACT CATACAGGCT
GTCAAAACGC TAACAAGTCT TTAA
 
Protein sequence
MQQITMGQAV QQALFEEMRR DPDVFIAGEG VGQSIHESPI MPTYGLLKEF GPSRVKDTPV 
SEAAIAGLAV GSSVMGLRPV VEIMFNPFIT IASDQIVNHA AKLRYLSGGK STFPMVVRVK
TGAGFGAGCQ HSHNLEAWVA HCPGLKVVMP GTPADAKGLL KSAIRDDNPV IFIEDMMLYF
APGQVPKEDY SIPIGVADIK KQGKDVTVVT WSKMLGVAFK AATELSKEGI EIEIVDLRTL
APLDKETILQ SVRKTGRLVI LHEATRTGGF GGEIAALVAE EAFGDLKAPI KRVAAPDIPV
PFSPPLEQFY IPNEGQLIQA VKTLTSL