Gene Dtox_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1086 
Symbol 
ID8428025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1110849 
End bp1111652 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content42% 
IMG OID645033421 
ProductRNA-binding S4 domain protein 
Protein accessionYP_003190595 
Protein GI258514373 
COG category[S] Function unknown 
COG ID[COG2302] Uncharacterized conserved protein, contains S4-like domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000637661 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAATCG ACGGTGAATA CATGCTTGAT CGCAGGAAGA TGCTTGACCG TATTCGGGAC 
CCGGAAGAAA AGGTTCTGTT AGCTCGTATA TTTGATTTGT GCGATAAGGT GAAGAACAAT
TGCCGCCTGC AGGTTACTGA TTTTTATGAC CCGCACCGAA TGAATCTGAT TGCTGCTATG
ATAGAAAATA TGGATTTGAA AATTTTGCTC TGGGGTGGTT ATGAAGAGGC GGAGAGAAAG
AGAATGCTGC TTGTCCCTGA GCATTACAAG GGAGAATGGC CTTCACTTAC TGGCTGCTTG
CTGGCTGAGG GAAATTTCAA AACGATTGAA GTTACTCACC GTGATTACCT GGGTGCTTTG
CTGGGTCTTG GCATTAAAAG AGAGAAATTG GGTGACATAA TTGTTTTGGA AAACGCTGCA
CAGTTAATAG TGGCGGAGGA AATAAGCGAT TTTATTGCAG CTAATTTGGT TAAAATAGGA
CGTGTTCGGG TTAGTGTTAA AAGAATAAAA GAGCAGGATC TAATTTTGCC TGAGAAAAAG
TTTAAGGAAA TACGCACTAC GGTACCCTCC TTACGCTTTG ATGTTATCTG TGGCGAGGGT
TTTGGTACGT CCAGATCCAA AATTGCCAGA GAGATAACGG CGGAAAAGAT AAATTTAAAC
TGGCAGTCCT GTTCTGATTT ATCACGACCT GTTAAGGAAA AGGATATTAT TTCAGCCCGT
GGGAGGGGCA GGCTGGAAAT ATACGAGGTT GGCGGGAAAA CAAAAAAGGG CAGGCTAGTG
GTTGTTTTGC GTAAATATTT ATAA
 
Protein sequence
MKIDGEYMLD RRKMLDRIRD PEEKVLLARI FDLCDKVKNN CRLQVTDFYD PHRMNLIAAM 
IENMDLKILL WGGYEEAERK RMLLVPEHYK GEWPSLTGCL LAEGNFKTIE VTHRDYLGAL
LGLGIKREKL GDIIVLENAA QLIVAEEISD FIAANLVKIG RVRVSVKRIK EQDLILPEKK
FKEIRTTVPS LRFDVICGEG FGTSRSKIAR EITAEKINLN WQSCSDLSRP VKEKDIISAR
GRGRLEIYEV GGKTKKGRLV VVLRKYL