Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_5005 |
Symbol | |
ID | 8130633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2159773 |
End bp | 2160468 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003422330 |
Protein GI | 284928598 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.667928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.181492 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATGC AGCGCTATTC GTGGTACATC GAGGATGCCA TGGCGCGGGT GCCGCCCTTG GGCACTGCCT GGGTGAGGCG GCTGATCAAC GGCCCCATTC CCTACGCGCC GGACGGTCTG TCCCTGCTGG GGCCGATGCC CGGCGTGCCC AACGCGTTCG AGGTCCAAGC GCGCACCTTC GGGATCGTGC AGGCGGGCGG GACCGGCAAG GTTCTGGTTG AGTGGCTCCG CGATGGTCAG GCCGAGTGGT ACATGTGGGC GGCCGATCCA CGCCGCAAGA CCGGCTATGC GGACGAGGAC GACAGTCGCG CCAGGGCGCT AGAGACCTAT GGCCATGAAT GCGCCATGCA CTCGCCCATC ACGCGTGGCC CGCGGGGCGC AATTCGGCGC CTATACCGGG TGGGAGCGGG CGGTCTGGTT CGCCGAGCCG GGCGACGACA CGTCCGAGGC CGCCACGGTC AGCGCGCTGC CCTTCCGGGA TCCGGAGAAT GCGCGGCTGA TCGCGAAGCG ACATGCCCGG CAGGGGAGGC TGGCGGCGCG GGGGCAGGGT CAGCCCGCCA CGCCGACGCG GGATCGGGAG ACGCCGGGTT GCCTGCAGAG CCAAAGGGCT GCGACATGGC CGCTTACCGG TCCACGCGCT CTCTCGCGCA CCTCCGAGGC CGATCCAGGG CGCCAGGGCT CAGCGCATCA CCATGA
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Protein sequence | MNMQRYSWYI EDAMARVPPL GTAWVRRLIN GPIPYAPDGL SLLGPMPGVP NAFEVQARTF GIVQAGGTGK VLVEWLRDGQ AEWYMWAADP RRKTGYADED DSRARALETY GHECAMHSPI TRGPRGAIRR LYRVGAGGLV RRAGRRHVRG RHGQRAALPG SGECAADREA TCPAGEAGGA GAGSARHADA GSGDAGLPAE PKGCDMAAYR STRSLAHLRG RSRAPGLSAS P
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