Gene Dshi_4226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4226 
Symbol 
ID5714737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009959 
Strand
Start bp71714 
End bp72295 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content71% 
IMG OID641277121 
Producthypothetical protein 
Protein accessionYP_001542417 
Protein GI251833006 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.969803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTTGC GCGTGCTCCT GATCTTTCTG CTCTGCCTGC CCGGTCCGGT CCTGGCGGGC 
AGCTCTGCCG AGGCCATGGC CAAGCGGCCG GAGCTGTTCG ACCCGGCGAC GGGCTACCGA
ATCGACCGGC AGCGCGCGCC CACGCCCGAG GACATTCCGC CCCCCGCGCG CCTCGTCGAC
ACCGAAGAGG CGGCGGCGCT GATCGCGGCC GGGGCGCTGG TGCTGGATGT CTACGGGGCG
AGCCAGTCGC GATTCGACGA GCTGGACGGC ACCTGGCTGG TCTCGCAGCA GCGGCTGAGC
CTGCCCGGGG CGCTCTGGCT GCCGGAGACC GGGCGCGGGT GGCTGGAGCC GGTGTTGCAG
ACCTACCTGG TGGATAACCT CGCCCGGGCC ACGGGCGGCG ACATGGCGCG CCCGATCGTG
GTCTACTGCA TCGCCGATTG CTGGATGAGC TGGAACGCGG CACAGCGGAT CGCTGCCTTG
GGCTATGAGG CGGTCTATTG GTACCGGCTG GGCACGGATG GCTGGCTCGA TGCGGGGCGC
GCGCTGTTCC CTGTGGACCC GGTGCCGGTG AACGTGGAGT GA
 
Protein sequence
MVLRVLLIFL LCLPGPVLAG SSAEAMAKRP ELFDPATGYR IDRQRAPTPE DIPPPARLVD 
TEEAAALIAA GALVLDVYGA SQSRFDELDG TWLVSQQRLS LPGALWLPET GRGWLEPVLQ
TYLVDNLARA TGGDMARPIV VYCIADCWMS WNAAQRIAAL GYEAVYWYRL GTDGWLDAGR
ALFPVDPVPV NVE