Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3952 |
Symbol | |
ID | 5714481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009957 |
Strand | - |
Start bp | 20083 |
End bp | 20556 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641276865 |
Product | lipoprotein signal peptidase |
Protein accession | YP_001542161 |
Protein GI | 159046491 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.386002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAACTT GCCTCTTCGT CGGTCTGCTT GCTGCGCTGA TCGCCTTTCT TGTCGATCAG GCAACGAAGG CAATCGTTGT GTCCAATGCG ACTGTTCTTA GTTCCGGCGT ATCGGTCTTT CCCGGCTTCA ATCTCATCTA CCTGCGCAAT GACGGAGTGA CCTTCGGGCT TCTCGGCGGC GCGCCGTGGT GGAGCCTTGT CTTACTGGCG CTTGGCATCT GCGTCTGGCT GGCGTTCATG CTGGTCCGTA CCAGCAGCCG GGTCGAGGCC ATTGCCTATG GTGCGATCAT CGGCGGTGCA CTCGGCAATA TTCTGGACCG CCTGCGCTAT CGTGCGGTGA CGGATTTCCT CGATTTCTAC ATCGGGACGG CGCACTGGCC TGCCTTCAAC ATGGCCGATG TTTTTGTGGT TGGCGGCGTG ATGCTGCTGC TCATTGCGCC GTGGGTTGGC GCTCGACTTC AGACCGATTC ATGA
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Protein sequence | MRTCLFVGLL AALIAFLVDQ ATKAIVVSNA TVLSSGVSVF PGFNLIYLRN DGVTFGLLGG APWWSLVLLA LGICVWLAFM LVRTSSRVEA IAYGAIIGGA LGNILDRLRY RAVTDFLDFY IGTAHWPAFN MADVFVVGGV MLLLIAPWVG ARLQTDS
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