| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3888 |
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| Symbol | |
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| ID | 5714417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | - |
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| Start bp | 111091 |
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| End bp | 112716 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641276801 |
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| Product | L-amino-acid oxidase |
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| Protein accession | YP_001542097 |
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| Protein GI | 159046426 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1231] Monoamine oxidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.898233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.195386 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGACG ACCCCCGGTT TCAGATGTCC CGCCGCGACC TGCTTCAGCT GATCGGTGTC
GCCGGCGGCG CCAGTGCCAT GATGGGCGCA ATGACCACGA TGGGCCATAG CCTGCCCTCG
CCCTATGACG GCCCACCGGC CCTCGAAGGC GCCCCCCAGG GCGAGAAGGT CCTCGTGCTC
GGCGCTGGCC TTGCGGGCAT GGTCGCGGCC TTTGAGTTGC GGCGCGCGGG CTACGAGGTC
GAAATCCTCG AATACCAGAG CCGCGCGGGC GGCAGGTGCT GGACGCTCAA GGGCGGCGAC
AGCTTCCGTG AGCTTGGTGG ATACGAGCAG ACCTGCAACT TCAGCCAAGG CCAGTACATC
AACATCGGCC CCTGGCGTAT CCCGCACCAC CACCGCGCGG TGCTCGATTA CTGTCAGCGC
CTCGGGGTGG AGCTTGAGAT CTTCGTGCAG GAGGACCAGA ACGCTTTCCT GCACTCCCCC
GACGCGTTCG GCGGCAAGCC CCAGCGATAC CACAACATCT GGGCCGATTA CGTCGGCGGC
ATCACCGAGA TGCTGGCCAA AAGCGTAAAC CAGGGCGCCT TCGCCGACCA GATCACCGCC
GAGGACGCCG AGATGCTGCT TGAAAGCCTC AAGTCCTTCG GCGTGCTCGA CGGCCAGTAC
CGCTATACCG AGCGGCTCGA GGTCTCGAGC TATCGCGGCT ACCCCAACTC CGGCGCGCCG
GGCGGTGGGC TGCTCGACGC CGCCCCCACC CCGGAAAAGC CAATCGAGCT GAAAGACATC
CTCGACAGCC GGTTCTGGCA GTACCTGCGC AATCATACGA CCTATCGCCA TCACGCACCG
ATGTTCCAGC CCAAGGGCGG AATGGAGGAG ATCGCCCATG CCTTCGAACG CGAGGTCGGC
GATCTGATCA CCCACAACGC GCGGGTCACC AGGATCATGC AGGACAGCGC AGGCGTCACC
GTCGACTGGA CCGAAACCGG CGTCAGCGGC AAGGAGCATC GGTCGACCGC CGACTGGTGC
GTCTGCACGA TCCCCTTCAC GGTGCTCAGC CAGATCGAAA TCGATGTCGC CGCCGACATG
CGCGCGGCCA TGCGCGAGTT GCACTATCAC GAGTCGGTCA AGGCCGGCTT CGAAATGAAG
CGTCGCTTCT GGGAACAGGA TCTCGCGATC TATGGCGGCA TCACCCTGAC CGACCTGCCG
ATCGCCGAGA TCGGCTATCC CTCGAACGAA ATGCACTCGA CCGGACCGGG CGTGTTGCTG
GCCGCGTATG TCTATGGGCC TCAGGCCTAT GCCTACAACT CCATGTCGCC CGAAGAACGA
ATAGAGAGCA TCCGCAACCA GTTGAAGATC ATTCACCCCC AGGCAGCCGA GGAATTCAGC
TCCGGTGTCG CGCTGAGCTG GCACCGTGTG CCCTGGATGC TGGGGTGCTA TTCGAATTGG
GACACCCGCG ACGAAAGCTA CCGTGCCGCG GCCCGGGTCG ACCGGCGGAT CGTCTGTGCG
GGCGAACATC TGAGCTACCT GCCCGGTTGG CAGGAAGGCT CGATCCTGTC TTCGCTCGAC
GCGATCCGGC GCCTGAACGA CGTGGCCGCC TCGGGCCTGT ATTCCACGCA AGGAGGCAAC
CAATGA
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| Protein sequence | MQDDPRFQMS RRDLLQLIGV AGGASAMMGA MTTMGHSLPS PYDGPPALEG APQGEKVLVL
GAGLAGMVAA FELRRAGYEV EILEYQSRAG GRCWTLKGGD SFRELGGYEQ TCNFSQGQYI
NIGPWRIPHH HRAVLDYCQR LGVELEIFVQ EDQNAFLHSP DAFGGKPQRY HNIWADYVGG
ITEMLAKSVN QGAFADQITA EDAEMLLESL KSFGVLDGQY RYTERLEVSS YRGYPNSGAP
GGGLLDAAPT PEKPIELKDI LDSRFWQYLR NHTTYRHHAP MFQPKGGMEE IAHAFEREVG
DLITHNARVT RIMQDSAGVT VDWTETGVSG KEHRSTADWC VCTIPFTVLS QIEIDVAADM
RAAMRELHYH ESVKAGFEMK RRFWEQDLAI YGGITLTDLP IAEIGYPSNE MHSTGPGVLL
AAYVYGPQAY AYNSMSPEER IESIRNQLKI IHPQAAEEFS SGVALSWHRV PWMLGCYSNW
DTRDESYRAA ARVDRRIVCA GEHLSYLPGW QEGSILSSLD AIRRLNDVAA SGLYSTQGGN
Q
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