| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3887 |
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| Symbol | |
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| ID | 5714416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | - |
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| Start bp | 110663 |
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| End bp | 111094 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641276800 |
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| Product | cytochrome c class I |
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| Protein accession | YP_001542096 |
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| Protein GI | 159046425 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.389814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCCGT TTCGTATCAC GACACTGGCC GTCGGCTGCA TCGTGGCCGC GACGGCGCTA
TTTGCCCAGG GCAATCCCGA ACGACACGAG TCGACCGAGG CCCTTTCGGC AAGCACGGAC
GGCTTCCTCG TGAACAGCGG TGAAGAGATC TACATGGTCG CCTGCGCCGG CTGCCACCAG
CCGCAGGGCC AGGGCGCTTT GGGCGCTGCA CAATACCCGA CCCTCGCGGC CAATCCGCGG
CTGCAAAGCG CACGGTATCC GGCCTGGATC GTGGTGAACG GCATGGGTGC GATGCCCGCC
TTCAACGATT GGCTGAGCAA CGAGCAAATC GTCGAAGTCG TCACCTATAT CCAGCAGAAC
CTCGGCAACC GCTATGACAG CAACCTGACA CCCGAGGAGG TCCAGAACCT GCGCGACGCG
CCAGCGCCAT GA
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| Protein sequence | MNPFRITTLA VGCIVAATAL FAQGNPERHE STEALSASTD GFLVNSGEEI YMVACAGCHQ
PQGQGALGAA QYPTLAANPR LQSARYPAWI VVNGMGAMPA FNDWLSNEQI VEVVTYIQQN
LGNRYDSNLT PEEVQNLRDA PAP
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