Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3541 |
Symbol | puhB |
ID | 5713772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3724493 |
End bp | 3725170 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641269470 |
Product | putative photosynthetic complex assembly protein |
Protein accession | YP_001534875 |
Protein GI | 159046081 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAGACC ATCACGACGA TTTCCATTTC GAGCCTGTCG AAGGGCTCCC TGAACTGCCC CCCGAGGGCG AAACCATCCT GTGGCAGGGC AAACCGAACT GGTGGGCCCT CGCCAAGGAG AGCCTGGCGC TGAAATGGGT CATGGGGTAC TTCGTGTTCC TCGGGGCCTG GCGCTCGGTG GCGTTGATGG CGCAGCACGA CACCCTGACC AGCCTGAAAG GGATGATCCC CTTCCTGATC CTCGGCCTGA TCGTCTGCGG TATCCTTACC GCGATCGCCT GGACCCAGGC GGTGACCACG ATCTACACGG TCACCAACCG CCGCATCGCC ATGCGGATCG GGGCGGCGCT CACGATCACC TACAACTTCC CCTACCGCTG GATCGGGTCG GCCGACCTTG ACCTGCGCAA GTCCGGCACG GGGACCATCG CGCTCAAGCT CACGGGCGAC ACGCGCATGA GCTACCTCAA CTGCTGGCCC CATATCCGCC CCTGGCACAT CCGCGACCCC GAGCCTGCCC TGCGCTGCAT CCCCGATGCG GCCAAGGTGG CCGAGATCAT CGCAGAGGCC GCCGAAAGCG CGGTGTTCCG CGCCAAGACC CAAGCCCAGC CCGAAACCGG CAAGGCCACC GTGGATGCGC AGACCGCATC CGGCGCGGTG CCCATGCCCG CAGAATAA
|
Protein sequence | MSDHHDDFHF EPVEGLPELP PEGETILWQG KPNWWALAKE SLALKWVMGY FVFLGAWRSV ALMAQHDTLT SLKGMIPFLI LGLIVCGILT AIAWTQAVTT IYTVTNRRIA MRIGAALTIT YNFPYRWIGS ADLDLRKSGT GTIALKLTGD TRMSYLNCWP HIRPWHIRDP EPALRCIPDA AKVAEIIAEA AESAVFRAKT QAQPETGKAT VDAQTASGAV PMPAE
|
| |