| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3339 |
|---|
| Symbol | |
|---|
| ID | 5712397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 3505663 |
|---|
| End bp | 3506544 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641269268 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001534673 |
|---|
| Protein GI | 159045879 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4246] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAACC GTCCTCGCCG CGCGCTAGCG GTCTGTTGCC TGGTCCTGTG GGCTTCGACC
GCGGGTGCGG CGGAGCTGGT CGGTCGGATT ACTTGGACGG ATCCTCACCC GCTTTTCGGG
GGGTTTTCCG GGTTGGCGGT GGCGGAGAAC GGGACCGACA TCGTGGCCCT CGGAGACCGC
GCGGTGCTCG CCGATGGGGT ATTGAGCCGC GATGCGAACG GTAACCTGAA CGGGATCACG
CGCGGTCGAC TGATGCCGCT GCTTCGGAAG AACGGTGATG GTCTGCCTGA GTATTTCAGG
GATTCGGAGG GGCTGCACCG ATATCCCGAT GGTCGGTTGC TGATTTCCTT TGAAGGCTAT
CACAGGGTGG AACACCATGA CCCCGAGACA GGACGCATGC TGGGCCGGTT ACCCCGTCCG
GCCTTTTTCG ACGAGTTCCA GAACAATTCC AGCCTCGAAG CACTGGCCGC TGACAGTCGT
GGCTGGATCT ACATGGTGCC GGAACGCTCA GGCAAGTTGG ACCGGCCCTT TCCGGTTTAC
CGCTTCGACG GCGAGGCATG GAGCGTACCC TTCGCCCTGC GGCGGGACGG GGATTTCCTG
GTGGTCGGGA TGGATTTCGG GCCGGATGGG CGTCTTTACC TGCTGGAGCG TGCGCTGCGC
GGCCTGTTCT TTGCCACGCG GGTCCGACGG TTCGAGATCG CCGAAGGTGC GCGGGTGGTT
TCGGAAGAGA CGCTGCTGGA GACCGCCGCC GGCACCCATG ATAACCTCGA AGGCATCTCG
GTCTGGCGAG ATGGTGCGGG AGACATCCGC ATAACCATGA TTTCCGACGA CAATTTTCGT
TTCCTGCAGC GCACGGAGAT CGTGGAGTAC CGGCTCGACT AG
|
|---|
| Protein sequence | MPNRPRRALA VCCLVLWAST AGAAELVGRI TWTDPHPLFG GFSGLAVAEN GTDIVALGDR
AVLADGVLSR DANGNLNGIT RGRLMPLLRK NGDGLPEYFR DSEGLHRYPD GRLLISFEGY
HRVEHHDPET GRMLGRLPRP AFFDEFQNNS SLEALAADSR GWIYMVPERS GKLDRPFPVY
RFDGEAWSVP FALRRDGDFL VVGMDFGPDG RLYLLERALR GLFFATRVRR FEIAEGARVV
SEETLLETAA GTHDNLEGIS VWRDGAGDIR ITMISDDNFR FLQRTEIVEY RLD
|
|---|
| |