Gene Dshi_3261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3261 
Symbol 
ID5712318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3427775 
End bp3428380 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content66% 
IMG OID641269189 
Producthypothetical protein 
Protein accessionYP_001534595 
Protein GI159045801 
COG category[S] Function unknown 
COG ID[COG3334] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGGG GAACCTTGTC CATGCGCAGC CTGACCCGGC CGTTGATGGT GGTGGCGATC 
ATGCTGGTCG GTTCTGCCGC GATCCGTTTC TCGGAAGGAA TCGGTCCGGT CATGGCCGAT
GCCACCAGGG GCGCCATGGA CAGCGGCGCC GCCGCCATCC GCGCGGCGAC GGAGCCCGAG
CTGGACCTTC TGCAGAAATC CCTGCTGTCG CGGGAGGCCG ATCTGGTCGC CCAGGCCGAG
ATCGTGGCCG CCCGGGAAGC CGCGGCACAA GCCGCTGAAG AGGAAATCGC GCGCCGCCAG
GCCGAGCTTG ATGCGGCCGA GAACGAGCTG GCCCATGCGG AGGCGGACCT GGAACGTCGG
GTCCGGACCG CCAAAACCGC GAACGAGACC GACATCGCCA AACTCGTGGC CGTCTACGAG
GCCATGAAGC CGCAGGATGC CGCTGAGGTG TTCGAGGCGA TGTCGCCCGA GTTCGCCTCC
GGTTTTCTCA GCGAGATGTC CCCAAACACC GCCGCCATGA TCCTCGCGGA TCTGTCGCCG
GAATTTGCCT ACTCCGTGAG TGTTCTGATG GCCGGTCGCA ATGCCGGTAT GGACGAGTCG
AATTGA
 
Protein sequence
MARGTLSMRS LTRPLMVVAI MLVGSAAIRF SEGIGPVMAD ATRGAMDSGA AAIRAATEPE 
LDLLQKSLLS READLVAQAE IVAAREAAAQ AAEEEIARRQ AELDAAENEL AHAEADLERR
VRTAKTANET DIAKLVAVYE AMKPQDAAEV FEAMSPEFAS GFLSEMSPNT AAMILADLSP
EFAYSVSVLM AGRNAGMDES N