| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3140 |
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| Symbol | |
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| ID | 5712196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3306735 |
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| End bp | 3307787 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641269067 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001534474 |
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| Protein GI | 159045680 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATCGA CGCGCGTGAC AGCCAGGGAT GTGGCGCGGG CCGCCGGGGT GAGCCAGCCC
ACCGTCAGCC GCGTCTTCAG CCGCTCGGCG GCCGTCGATC CGGCCAAGGC CGACCGCGTC
CGCGCCGCCG CACGGGAGCT GGGCTATATC CCCAACCTCG TGGCGCGGTC GCTGAACTCG
GGCCATTCCT TCCGCATCGG CATCGTGCTC GCCTATCTCA AGAACGGGTT TTTCAGCGAC
GCGTTGCAGC GGCTTTCCAA GGCCCTGAAC GCGCGGGGCT ATTCCGTGAC GGTCTATTTC
GCGGGCAACC AGTCCGACGA GGTCGACGCC ATCGTCGACG ACTTGCTGGC GGACCGGGTG
GACGGGATCA TCCTTGCCTC CATCAGCCTG TCCAACAGCC TCGTTGCGCG GGTGCGCAAG
TCGGGCATCC CCTGCGTGCT TTTCAACCGC GGGCAGGCGG ACCCGGATGT CTCGATGGTG
ACGGCGGCGA ATGTCGCCGG GGCACGGGCG GCGACCGAGT TTCTGATCGC CGGCGGGCAT
ACCCGGATCG CCCATCTCGC CGGATGGCGC AAGTCGATGA ACGGGCGCGA CCGGCAGGCG
GGGTTCCTGG CGGCCATGGC GGCGGCCGGA CTGGCCCCGG TGGCCTGTGT CGATTGCCAT
TTCCGCCGCA GCGTGGCGAT GGACGAGACC CGCAAGCTCT TTGCCGAGGG GCCGGGCGCA
GACGCGATCT TCGCCGCCAA CGATCACATG GCCTTCGGCG TGCTCGAAGT GCTGCGCGCC
GAACTGGGCC TGCGGGTGCC CGAGGATGTC TCGGTCATCG GCTATGACGA CGCGCCCATG
GCGGGCTGGA AGACCTTCGA TCTGACCACG GTGCGCCAAC CGCTGGAACG GATGACCCGC
AAGACGGTCG ACCTTCTCAT CGCCCGGATC ACCGAGCCCG ACGCCCCGCC CGAGAAGATC
GAGATCCCGG GCGACCTGAT CGTCCGCGGC TCCGCCCGGC ACCCGCCCGG CTGGACCCCA
CCCCCTGAAC ACACGCCCCA ACCCAGGACC TGA
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| Protein sequence | MGSTRVTARD VARAAGVSQP TVSRVFSRSA AVDPAKADRV RAAARELGYI PNLVARSLNS
GHSFRIGIVL AYLKNGFFSD ALQRLSKALN ARGYSVTVYF AGNQSDEVDA IVDDLLADRV
DGIILASISL SNSLVARVRK SGIPCVLFNR GQADPDVSMV TAANVAGARA ATEFLIAGGH
TRIAHLAGWR KSMNGRDRQA GFLAAMAAAG LAPVACVDCH FRRSVAMDET RKLFAEGPGA
DAIFAANDHM AFGVLEVLRA ELGLRVPEDV SVIGYDDAPM AGWKTFDLTT VRQPLERMTR
KTVDLLIARI TEPDAPPEKI EIPGDLIVRG SARHPPGWTP PPEHTPQPRT
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