| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2761 |
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| Symbol | |
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| ID | 5713660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2922178 |
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| End bp | 2923956 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641268686 |
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| Product | uncharacterized transporter |
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| Protein accession | YP_001534095 |
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| Protein GI | 159045301 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0332677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCGG ACCAGATCCT CTTGTTCAGC CTGTTCGGTC TGGTGTTTGC CTTCCTGCTC
TGGGGGCGGA TCCGGTATGA CGTGGTGGCC TTCAGCGCAC TGTTGCTGGG CGTGGTTCTG
GGCGTGGTGC CGACGGAGGC CGCGTTTTCC GGGTTCGGCC ATCCCGCGAC GCTGGTGGTG
GCGCTGGTGC TGGTGGTGTC GGCGGGGCTG GTGCGGTCCG GCGCGGTGTT GCTGATCACG
CGGACGCTGG TGGATGCGAC GCGCGGGTTG GCGGCGCATA TCGCGATCAT GGGGGCGGTG
GGCGCGGTTC TGTCGGCGTT CATGAACAAC GTGGCGGCGC TGGCTTTGTT GATGCCGGTG
GATATCGCGA CCGCGCGCAA GGCGGGGCGG GTCGCGGGGC TGAGCCTGAT GCCGCTGAGT
TTCGCGACGA TCCTAGGCGG GATGGTAACG CTGATCGGTA CGCCGCCCAA CATCATCATC
GCCGCGATCC GCGAGGAAGC GGTGGGCGCG CCCTTCGCCA TGTTCGATTT TGCACCCGTG
GGCGGGGTGG CGGCCATCGC CGGGCTGGCC TTCGTGGCGC TGGTGGGATG GCGGCTGATC
CCCAGCCGGG AGGGGGCGAC GGTTTCGGGC GGCGGTCTGG AGCAATTCGC GGACTATATC
GCCGAGTTGA CCGTGCCGGA GGAGAGCGCG CTGATCGGGG CCCCCCTGAG CGATGTCTAT
CCCGAAGCGG AGCGGGCGGA CGTGGCCCTG CTGGGCGTGA TCCGGAATGG CAAGCGGCGG
TTCGCGGCGC GGCATCTCAA GCTCGCGGCG GGCGATGCGC TGGTGCTGGA GGCGCAGCCC
GAGGCGCTGG ACGAGTTCCG CACGGCGCTG AAGCTGGATT TCTCTGACGC GCGACGGTTG
GAGGATTTGC AGGCGGATGG CAGCGGCGTC AGTTTCGTCG AGGCCGTGGT GCCCGATACC
GCCCGGATCG TGGGGCGCAG TGCCGAGGCC ATCGGCCTGG CCTGGCGGCG ACGGACCGTT
CTGATGGGGA TTGCGCGGCA GGGCACGCGG ATTTCGCGGC AGGTGCGCAA GACCGAAGTG
GCACCGGGGG ATATCCTGCT GCTGCTGGTG CCCAGCGAGG CGAAGGACGA GGTTCTCGAC
TGGCTCGGGG TTCTGCCGCT GGCGGATCGG GGCGTGCGGG TGACGCAAGG GGCCAAGACC
TGGGCTGCGA TCGGCATATT CGCGGCGGCG GTTGCGGTGG CGGCGCTCGG GCTGGTCTAT
CTGCCCGTGG CGCTGGGGAT CGTGGCGATG GCCTATGTGC TGTTGCGGAT TCTGCCCGTG
GCGGAGCTTT ACACCCATAT CGAGTGGCCG GTCGTGGTGC TTCTGGGCTC GATGATCCCG
CTGGGGGCGG CCCTAGAAAG CTCTGGCGGT ACCGAGTTGC TGGCGGGGGC TTTGCTGGGG
TTGACCGAGG GATTGCCGGC CTGGGCGGTG CTGACCGTGC TGATGGTGGT GACGATGACC
CTTTCGGATG TGCTCAACAA CACCGCGACG ACCATCGTGG CGGCCCCGGT GGGGATCGAG
ATGGCAAGAG TGCTGGGCGC GTCGCCCGAC CCGTTCCTGA TGGCGGTGGC GGTGGCGGCC
TCGGCAGCGT TCCTGACGCC CATCGGGCAC AAGAACAACA CGCTGATCCT GGGGCCCGGG
GGGTACGGGT TCGGGGATTA CTGGCGGATG GGGTTGCCCC TGGAGGTGTT GATCATCGCC
GTGTCGATCC CGACGATCCT GGTGGTCTGG CCGCTTTAG
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| Protein sequence | MTSDQILLFS LFGLVFAFLL WGRIRYDVVA FSALLLGVVL GVVPTEAAFS GFGHPATLVV
ALVLVVSAGL VRSGAVLLIT RTLVDATRGL AAHIAIMGAV GAVLSAFMNN VAALALLMPV
DIATARKAGR VAGLSLMPLS FATILGGMVT LIGTPPNIII AAIREEAVGA PFAMFDFAPV
GGVAAIAGLA FVALVGWRLI PSREGATVSG GGLEQFADYI AELTVPEESA LIGAPLSDVY
PEAERADVAL LGVIRNGKRR FAARHLKLAA GDALVLEAQP EALDEFRTAL KLDFSDARRL
EDLQADGSGV SFVEAVVPDT ARIVGRSAEA IGLAWRRRTV LMGIARQGTR ISRQVRKTEV
APGDILLLLV PSEAKDEVLD WLGVLPLADR GVRVTQGAKT WAAIGIFAAA VAVAALGLVY
LPVALGIVAM AYVLLRILPV AELYTHIEWP VVVLLGSMIP LGAALESSGG TELLAGALLG
LTEGLPAWAV LTVLMVVTMT LSDVLNNTAT TIVAAPVGIE MARVLGASPD PFLMAVAVAA
SAAFLTPIGH KNNTLILGPG GYGFGDYWRM GLPLEVLIIA VSIPTILVVW PL
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