| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2754 |
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| Symbol | |
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| ID | 5713653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2916220 |
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| End bp | 2916810 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641268679 |
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| Product | tripartite ATP-independent periplasmic transporter |
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| Protein accession | YP_001534088 |
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| Protein GI | 159045294 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.03848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCAT TGCTGGCGGT GCTTGCACCG TTCCGGATCG TCAACGAGGC CCTCTTCAAG
GTCGGGCGCG GGCTTGGCGT GATCTGCGTG GCGGCCATGG TCGTGGCGAT CCTGATCCAG
GTGTTCTTCC GATATGTTCT GAACAATGCG CTGCCCTGGC CGGACGAGGC CGCGCGGTTT
GCCATGCTGT GGATGACCGG GTTGATGGCG CCGACGGCGT TCCGGCGCGG CGGCTTCGTG
GCCATCGACA TGGTGGTGCG GCTGCTGCCG GTGCGTCTGG GCGCGTTGCT GTCGCTGTTC
TTGTTGTTCG TGATGCTGCT GGTGCTGGTC ATCGCGGCGC AGATCGGCTG GTCCGAGGTC
ACGGGCTTTG GCGGGCGGTT CGCCACTGCT TCGCTCTACC TGCCGACGAA CCTGAGTTTC
ACCGAATGGT TCCGGGTGCC GCGGAGCTGG ATGATGGCCT CCCTGCTGGT GGGGATCATC
ATGATGATCT CGGCCAATAT CGAGCTCATC CTGCGGGCCG TGATTTCCCT TCTGGGCGGT
GCGGAGAATT TGCCGGAGAT CCCCGGCACC GAAACCATAG GGGCCGAATG A
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| Protein sequence | MGALLAVLAP FRIVNEALFK VGRGLGVICV AAMVVAILIQ VFFRYVLNNA LPWPDEAARF
AMLWMTGLMA PTAFRRGGFV AIDMVVRLLP VRLGALLSLF LLFVMLLVLV IAAQIGWSEV
TGFGGRFATA SLYLPTNLSF TEWFRVPRSW MMASLLVGII MMISANIELI LRAVISLLGG
AENLPEIPGT ETIGAE
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