| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2564 |
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| Symbol | |
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| ID | 5713461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2727753 |
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| End bp | 2730098 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268487 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533898 |
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| Protein GI | 159045104 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3497] Phage tail sheath protein FI |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00387686 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000000000127886 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGGTCT ACCAATCCCC CGGCGTCTAT ATCGAAGAAA TCCCCAGCGG CGCGCGTCCC
ATCGAGGGGG CGGCCACGTC CGTTGCGGCC TTTGTCGGCT CGGCCAGGCG AGGACCGGCG
GGCAGCGCCG AGCCGATCGG CAAGCTGGAC GATTACAAGT CGCTTTATGG AGACATCACC
TCCGAGGACG ACGCCATGGG GCTTGCAGTG CAGGCCTTCT ATCTCAACGG GGGCAAGAAG
GCCTTTATCT GCCGCTTGGC GGGAGGGCTT TCGAAGGCGG CCTCGGTCTC GGTCAACGGT
CAGGGCTCGG GTGGGGCGAA CACGGCGCAG CCGGTCCTCG TTGTTTCGGC CTCCAGCGTG
GGCGACTGGG GCAATGATCT CTACATCCGC ATCGTGAAGC CGGACCCTGA TGCCCTGAGC
TTCGATCTGG AGGTCGGCGC GCGGATCGAT GGCACGTTCG AGTTGATGGA GCGTTTTGCG
GGGCTCGACA TGCGCGCGGG CTCGGACCGT TATGTCATTG ACGTGATCGC GGATCAGTCG
CGGCTGATCG ATGTGGCGCT GGGCCCGGAT GCGCAGGCCG AGCTTGCCGC GAGCGATTAT
GCCGATGCGA CGCTGCAAGG CGGCGATACC GGCACCGAGG CGACCTATTT CACCGCGGGG
CTGGGCGGTG CGACCTCTGG CACGCTGACG CTCAACCTCA ATGGGCGGGG GACAGAGACC
ATCACCGTGG ACCTGTCCAC CGCCGGGCTC GATGGCAGTG ACCATGTGGA CGATGCGGAC
CTGCTGGCGG CGGCGGTGCA GGCGGGTATC CGGGCGCATA GTCCGCTCGA TGTGTTTCAG
ACCGTCACCG TGGACTACAC CGCGCCCCGC TTCACCATTA CCGCGCCCGA GGACGGATCG
GTCGCGTCCC TGGCGGGGGG CGGTGGGACG CTTGGCGCGC TGATGCGGAT GACGCCGCAG
GATCGCGCCA CCCTGACCAG TGAACCTGCG GTCGGGGCCA GCGGGACGTT CTTTTCCAGC
GCGGCGAACG GGGTGAATGC GGCGGCCAAT GCCCCGACGG AGATCTCGAT CACCATCGAT
GGGCATGGTC CGGTGGCGGT GGCGATGGAT TTCACCGACA CCGGCTTTGT CGGCACCAAC
GGCACGGACG GTGCGCTGGT CGCGGGCGTG ATGGAGACCG CGATCCGCGC AGCACGGCCG
GACCTTGTGT CCTTCACCGA GGCGACGGTG GTCTATGACA CCAACCGCTT TGTCATCACG
TCGGGCAACC CGGCGCCACG CGTCAGTGGC GTGTCGGTCG CGGCGGGCAA CTTCGCCGAT
TACCTGAACC TGAGCACGGG CACATCCGTG GCCGGGCGCG CAGTGACCCA GGGCACTTCG
CCGGTCATGC CGCTGCAGAC CCTCGGATCC GGTGGCGAGG GGGAGCAACT GGTCGGCGGC
ACCACGGTCG CGCCGTCGGC GGCCGATTAC GCCGCCTTTT ACGACGGGGT GCTGCGCAAG
GTGCCGGATG TGACGATGAT CCTGTTGCCG GGCCAACCCT ATACCGAGAC CGGACCGAGC
CTGGAGATTT CCAACACCAT CGCCTTCGCC GAACGGGAGC GACGGATGAT GTTCATCGCT
GATCCACCGC CGGGGGTGGA GTTGACCACC GATACCGGGA TCGACGCGCT GCAGCTGACC
TCGTCGACCT ATGCGGCGAC CTATTACCCT TGGGTGCGCT CGCCCAACCC GCTTTACAAT
GTGGACTTAA ACCCGACCGC GCCCAAGACG GTTCTGATCC CGCCTTCGGC CTTTGCCGCG
GGGCTGTGGA CCAAGACGGA TGGGCGGCGC GGGGTCTGGA AGGCGCCCGC GGGGGTCGAG
ACCCGACTGG TCGGAGCTTC GGCGCTCGAA TTCGAAGTCG AGGAGTTGGA GCAGTCGACG
CTCAATCCGC GCGGCATCAA CTGCTTTCGG AAGCTGCCGA GCTTCGGGTC GGTGGTCTGG
GGGTCCCGGA CGCTGGCCAC CAAGGCGGTG CCGGAATGGC GCTATGTGCC GGTGCGGCGC
ACCGCGCTCT TCATTGAAAA GTCGATCAAG GACGGGATCC AGTGGGCGGT GTTCCAGCCC
AACGCGCATC CGCTCTGGGC ATCCCTGCGG ACCAATATCG GCGGGTTCAT GGATGGGCTG
TTCCGGGCCG GGGCTTTCCA GGGAGAGAAG GCCAACGACG CCTATTTCGT GCGCTGCAAT
CTCGGCGACA CGATGACCCA GGCGGATATC GACCGCGGCC AGGTGATCGT GATCGTCGGC
TTTGCGCCGC TGAAACCTGC GGAATTCGTC ATCGTGCGAA TTCAGCAGAA GGTCGCAGAA
CAGTAA
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| Protein sequence | MAVYQSPGVY IEEIPSGARP IEGAATSVAA FVGSARRGPA GSAEPIGKLD DYKSLYGDIT
SEDDAMGLAV QAFYLNGGKK AFICRLAGGL SKAASVSVNG QGSGGANTAQ PVLVVSASSV
GDWGNDLYIR IVKPDPDALS FDLEVGARID GTFELMERFA GLDMRAGSDR YVIDVIADQS
RLIDVALGPD AQAELAASDY ADATLQGGDT GTEATYFTAG LGGATSGTLT LNLNGRGTET
ITVDLSTAGL DGSDHVDDAD LLAAAVQAGI RAHSPLDVFQ TVTVDYTAPR FTITAPEDGS
VASLAGGGGT LGALMRMTPQ DRATLTSEPA VGASGTFFSS AANGVNAAAN APTEISITID
GHGPVAVAMD FTDTGFVGTN GTDGALVAGV METAIRAARP DLVSFTEATV VYDTNRFVIT
SGNPAPRVSG VSVAAGNFAD YLNLSTGTSV AGRAVTQGTS PVMPLQTLGS GGEGEQLVGG
TTVAPSAADY AAFYDGVLRK VPDVTMILLP GQPYTETGPS LEISNTIAFA ERERRMMFIA
DPPPGVELTT DTGIDALQLT SSTYAATYYP WVRSPNPLYN VDLNPTAPKT VLIPPSAFAA
GLWTKTDGRR GVWKAPAGVE TRLVGASALE FEVEELEQST LNPRGINCFR KLPSFGSVVW
GSRTLATKAV PEWRYVPVRR TALFIEKSIK DGIQWAVFQP NAHPLWASLR TNIGGFMDGL
FRAGAFQGEK ANDAYFVRCN LGDTMTQADI DRGQVIVIVG FAPLKPAEFV IVRIQQKVAE
Q
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