| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2515 |
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| Symbol | |
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| ID | 5713412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2678672 |
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| End bp | 2680408 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641268438 |
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| Product | putative sulfate transporter |
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| Protein accession | YP_001533849 |
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| Protein GI | 159045055 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0607396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACA CACTCAGGCG CCATATCCCC GTGCTCGATT GGAGCCGCAC CTATAGCCGT
CAGGCATTTT CGAACGACAT GATCGCGGCT GTGATCGTGA CGATCATGCT GATCCCGCAA
TCGCTGGCCT ATGCTTTGCT GGCCGGTCTG CCGCCCGAGG CCGGGCTTTA CGCCTCGATC
GTGCCGATCA TCCTCTACGC GATATTCGGC ACCAGTCGCG CGTTGGCGGT CGGACCCGTT
GCGGTGGTGT CGCTCCTGAC CGCCGCCGCG GTCGGGCAGG TCGCCGAGCA GGGCACGGCG
GGCTATGCCG TCGCGGCGCT GACGCTCGCT TTCCTGTCGG GTGGGTTTCT GGTGCTGATG
GGGGTCTTCC GCCTCGGGTT TCTTGCCAAC TTTCTGAGCC ATCCCGTGAT TGCCGGGTTC
ATCACGGCCT CGGGCATCCT GATTGCCGCG AGCCAGCTCA AACACATTCT CGGGGTCCGT
GCCGGTGGGC ACACCTTGCC GGAAATCCTT GTCTCCCTGG TCGCGCATCT CGACGAGATC
AACTGGATCA CGGTCGTGAT CGGGGTCGGT GCCACCGGGT TTCTGTTCTG GGTTCGCAAG
AACCTCAAGC CGACGTTGCG CAGGCTTGGC GCCCCCCCAT TGCTCGCCGA TATCCTGACC
AAGGCCGGTC CGGTGGCGGC GGTGGTGGGC ACGACATTGG CTGTCTGGGG CTTCAGTCTG
GCCGAGCGTG GTGTCAATAT CGTGGGCGAC GTGCCCCAGA GCCTGCCACC GCTGACCCTG
CCCGGCCTCT CGCCTGACCT GGTCGGGGCC TTGCTGGTGC CGGCGATCCT GATCTCGGTG
ATCGGGTTCG TGGAATCCGT CTCCGTCGCG CAGACGCTCG CGGCCAAGAA ACGCCAGCGG
ATCGACCCGG ACCAGGAGTT GATCGGGCTG GGCGCGGCCA ATATCGGGGC GGCCTTTACC
GGCGGATACC CGGTCACGGG CGGTTTTGCC CGCTCGGTAG TGAATTTCGA CGCCGGGGCC
GAGACACCCG CCGCGGGGGC TTTCACCGCC GTGGGACTCG CGATTGCCGC CGTGGCCCTG
ACGCCGCTGG TCTACTACCT GCCCACCGCA ACGCTGGCGG CCACGATTAT CGTGGCGGTG
CTGAGCCTCG TCGACCTGTT GATCCTGCGG AAAACCTGGG ATTACTCTCG CGCCGATTTC
ACGGCCGTTG CGGCGACGAT CCTGCTCACC CTCGGGCTCG GGGTCGAGGT CGGCGTGGCT
TCCGGCGTGA CGATCTCGGT CCTTTTGCAT CTCTACAAGA CATCGCGCCC CCATGTGGCC
GAGGTCGGCC TGGTGCCCGG AACCCAGCAT TTTCGCAACA TCAACCGCCA CAAGGTCGAA
ACCGACCCCA CCCTGGTGTC CCTGCGTGTG GACGAAAGCC TCTATTTCGT GAATGCCCGC
TTCCTCGAGG ATCTTATTCA GAAGCGCGTG ACCGAAGGAT GTCGCATCGA AAACGTCGTT
CTGATGTTCT CGGCGGTCAA CGAAGTGGAT TACTCCGCGC TGGAAAGCCT CGAGGCGATC
AACCACCGGC TGAAGGACAT GGGCGTCGGT CTGCACCTGT CCGAGGTTAA GGGGCCGGTG
ATGGACCGGC TCGAAAGGTC CCATTTCATC CGCGATCTCA ACGGGCAGGT GTTTCTGTCG
CAATACGAAG CCTGGATGCT CCTTACGAAA CCCGGGCTTG GGCAAGTGAC GGACTAA
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| Protein sequence | MIDTLRRHIP VLDWSRTYSR QAFSNDMIAA VIVTIMLIPQ SLAYALLAGL PPEAGLYASI
VPIILYAIFG TSRALAVGPV AVVSLLTAAA VGQVAEQGTA GYAVAALTLA FLSGGFLVLM
GVFRLGFLAN FLSHPVIAGF ITASGILIAA SQLKHILGVR AGGHTLPEIL VSLVAHLDEI
NWITVVIGVG ATGFLFWVRK NLKPTLRRLG APPLLADILT KAGPVAAVVG TTLAVWGFSL
AERGVNIVGD VPQSLPPLTL PGLSPDLVGA LLVPAILISV IGFVESVSVA QTLAAKKRQR
IDPDQELIGL GAANIGAAFT GGYPVTGGFA RSVVNFDAGA ETPAAGAFTA VGLAIAAVAL
TPLVYYLPTA TLAATIIVAV LSLVDLLILR KTWDYSRADF TAVAATILLT LGLGVEVGVA
SGVTISVLLH LYKTSRPHVA EVGLVPGTQH FRNINRHKVE TDPTLVSLRV DESLYFVNAR
FLEDLIQKRV TEGCRIENVV LMFSAVNEVD YSALESLEAI NHRLKDMGVG LHLSEVKGPV
MDRLERSHFI RDLNGQVFLS QYEAWMLLTK PGLGQVTD
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