| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2488 |
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| Symbol | |
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| ID | 5713385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2643636 |
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| End bp | 2645039 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268412 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533823 |
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| Protein GI | 159045029 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3800] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACTT TCATCGGACC CCGCCTGCGC CGTCTGCGGC GCGACGCCAA CCAGACCCAG
GCCGAAATGG CCAAGGCGCT GGGCATCTCC AACTCTTACG TGAACATGCT GGAAAAGAAC
GAGCGCAGCG TGTCCGTCCC GGTGCTCCTG CGCCTGTTCG AAGCTTACGG CGTCGATTGG
CGCGACATCG CCGACGAGGA CGATACCGCC ACCCTCAACG CCCTGCGCGC CGCGTTCCAG
GACCCGCTCT TTCACGATCA CAGCCCCGAT CTGCCGCAGC TGCGCGCGCT GCTCTCGCAC
GCGCCGGACG TGGCGCGCAG CTTTTTGCAA TTGCACCACG CCTACCGCGC GGCCACCGAT
CAGCTCTTGG TGCTCTCCAA TGCCAGCGAG ACCGATCTCG ACATCCTGCG TGCCTCCCCC
GAGGCGATCG TGCATGATTT CTTTCGCGAC AACCGCAATC ATTTCCCCGA GCTTGAAGCC
GCCGCCCAGG AGTTCTGGGC CGGCCCCATG CCCGAGGCCG ACGACATCTA CGGCGCGCTC
AAGGCTCGGC TGAAGGACAA GCTGGGCTTG CGGACCCGGA TCGTGCCCGT GGGCGACATG
CCCGAGGCCC TCCGCGAATA TGACGAGGAC CGGCGCGAAG TCCGTCTGTC CGAAGGGCTC
GACCATCCCA ACCGTGCCTT CCAGCTGGCC CATACGAGCG GGCTGATCGA ACAGAGCGCG
GTGATCGACG CGTTGCTGTC GCGGCTCGAC CTGGACGACC CGTCCGGGCG CAACCGCTGC
CGGGTGGAGC TGGCCAATTA TTTCGCTGCG GCCGTGCTCA TGCCCTATGA CGCCTTCCGG
GCCGAGGCGC TGGCCTGCAA GTACGACTTC GCCCACCTGT CCCTGCGCTT CGGCGTCAGC
TTCGAGCAGG CCTGCCACCG CGCCACCACC CTGCAACGCG ACGGGGCGGA AGGCGTGCCG
TTCTTCTTCC TGCGCATCGA CAAGGCCGGC AACGTGACCA AGCGGTTCAA CTCCACCGGC
TTTCACCTGG CGGAATATGG CGGCGCCTGC CCGCGGCTCG ATTTGCATAC GAGCTTCCGC
AGCCCCGGCA GCATCGTGCC GCAATTCGTC GAGATGCCCG ATGGCGGGCG ATTCTTCGTC
TTCGCCCGCA CGGTCAATCG CCCCCGCTTC TCGCGCCACA CCCAGGACAA GCGCCTGGCC
ATCGCCATGG GCTGCAGCAT CGAACATGTC GCGGCGATCG GCTATGCCGA GGATATCCAG
CAAGGCTCCC CGCGTTTCGC AGAGGTCGGG ATCAACTGCC GGATCTGCCC GCGCGCCAAT
TGCGACCAAC GCGCCCATAA CGCGATGATC CTGAACGAAC CGGTGGATGT CCGCCGCCGC
GGCCCGACAC GCTACGCCAA CTGA
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| Protein sequence | MKTFIGPRLR RLRRDANQTQ AEMAKALGIS NSYVNMLEKN ERSVSVPVLL RLFEAYGVDW
RDIADEDDTA TLNALRAAFQ DPLFHDHSPD LPQLRALLSH APDVARSFLQ LHHAYRAATD
QLLVLSNASE TDLDILRASP EAIVHDFFRD NRNHFPELEA AAQEFWAGPM PEADDIYGAL
KARLKDKLGL RTRIVPVGDM PEALREYDED RREVRLSEGL DHPNRAFQLA HTSGLIEQSA
VIDALLSRLD LDDPSGRNRC RVELANYFAA AVLMPYDAFR AEALACKYDF AHLSLRFGVS
FEQACHRATT LQRDGAEGVP FFFLRIDKAG NVTKRFNSTG FHLAEYGGAC PRLDLHTSFR
SPGSIVPQFV EMPDGGRFFV FARTVNRPRF SRHTQDKRLA IAMGCSIEHV AAIGYAEDIQ
QGSPRFAEVG INCRICPRAN CDQRAHNAMI LNEPVDVRRR GPTRYAN
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