Gene Dshi_2441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2441 
Symbol 
ID5714097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2583868 
End bp2584830 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content67% 
IMG OID641268364 
Producthypothetical protein 
Protein accessionYP_001533776 
Protein GI159044982 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.204703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCAT TCAAGACACA GATCGCGGCC GTCATGGCCG GTGTTCTGGC GTTGGGTACC 
AGCCCGGCGC TGGCGGACTA CCCGGAACGA CCCGTCACGA TCATCGTGCC ATGGGGCGCC
GGCGGCGGCA CCGATACCAT CATCCGGCTG TTTTCCATCG GCTTCGAAGA GGCCATGGGC
CAGCCCATCA ACGTGGTCAA CCGCACCGGC GGCTCGGGCG TCGTCGGCCA CTCGGCCATC
GCCAATGCCA CTCCGGATGG CTACACCCTG GGCGCCTGTA CCTCCGAGAT CACCTATTTC
GAAACCATCG GCCTGGCCCC GATCACGCCC GCGAGCTTCG ATCTGATCTC GCGCCTCGCG
GTGATCCCGG CAGGGGTGAC CGTCGCGGCC GACAGTCCCT ACAACTCGCT CGAGGAGTTG
ATCGCCGCCG CCAAGAAGGG CGGGTTGAGC TCCTCCGGCT CCGGCCTGGG CGGGCCATGG
CACATGGCCA TCGCGGGCAT GATGAAACAG GTCGGCGGCG ACGTGAACAC CGTGCAGTTC
ATCCCGTCCC AGGGCGGGGC CCCGGCGCTT CAGGATCTCG TGGCCGGCGG CATCAGCATG
TTCACCGGAT CGCCCATCGA GGCGCGCGCC CTGGCCGACG CAGGCGAAGT GAAGATCCTC
GGCATCATGT CCGACGAACG CTCGCCCGCC TTCCCGGATG TGCCGACACT GAAGGAAAGC
GGCGTGGACT GGTCGTTGAC CAACTGGTTC TCCCTGTGCG CGCCCGCGGG CCTGCCCGAG
GACGTGAAAG CCAGGATCGA AGCGGCCGCC GAACAGGCCC ACGGCTCCGC CGAGGTGCAA
GAGGCCCTGG CGCAGCGTGG CATCACGCCA CTTTTCGACG GCTCGGAGGC GTTTTCGTCC
TATGCCGCGG CCTTCGCCAA TGATGCGGCC GGCCTTCTGA CCGACCTCGG CCTGGCCCAG
TAG
 
Protein sequence
MTSFKTQIAA VMAGVLALGT SPALADYPER PVTIIVPWGA GGGTDTIIRL FSIGFEEAMG 
QPINVVNRTG GSGVVGHSAI ANATPDGYTL GACTSEITYF ETIGLAPITP ASFDLISRLA
VIPAGVTVAA DSPYNSLEEL IAAAKKGGLS SSGSGLGGPW HMAIAGMMKQ VGGDVNTVQF
IPSQGGAPAL QDLVAGGISM FTGSPIEARA LADAGEVKIL GIMSDERSPA FPDVPTLKES
GVDWSLTNWF SLCAPAGLPE DVKARIEAAA EQAHGSAEVQ EALAQRGITP LFDGSEAFSS
YAAAFANDAA GLLTDLGLAQ