Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2441 |
Symbol | |
ID | 5714097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2583868 |
End bp | 2584830 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641268364 |
Product | hypothetical protein |
Protein accession | YP_001533776 |
Protein GI | 159044982 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.204703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCAT TCAAGACACA GATCGCGGCC GTCATGGCCG GTGTTCTGGC GTTGGGTACC AGCCCGGCGC TGGCGGACTA CCCGGAACGA CCCGTCACGA TCATCGTGCC ATGGGGCGCC GGCGGCGGCA CCGATACCAT CATCCGGCTG TTTTCCATCG GCTTCGAAGA GGCCATGGGC CAGCCCATCA ACGTGGTCAA CCGCACCGGC GGCTCGGGCG TCGTCGGCCA CTCGGCCATC GCCAATGCCA CTCCGGATGG CTACACCCTG GGCGCCTGTA CCTCCGAGAT CACCTATTTC GAAACCATCG GCCTGGCCCC GATCACGCCC GCGAGCTTCG ATCTGATCTC GCGCCTCGCG GTGATCCCGG CAGGGGTGAC CGTCGCGGCC GACAGTCCCT ACAACTCGCT CGAGGAGTTG ATCGCCGCCG CCAAGAAGGG CGGGTTGAGC TCCTCCGGCT CCGGCCTGGG CGGGCCATGG CACATGGCCA TCGCGGGCAT GATGAAACAG GTCGGCGGCG ACGTGAACAC CGTGCAGTTC ATCCCGTCCC AGGGCGGGGC CCCGGCGCTT CAGGATCTCG TGGCCGGCGG CATCAGCATG TTCACCGGAT CGCCCATCGA GGCGCGCGCC CTGGCCGACG CAGGCGAAGT GAAGATCCTC GGCATCATGT CCGACGAACG CTCGCCCGCC TTCCCGGATG TGCCGACACT GAAGGAAAGC GGCGTGGACT GGTCGTTGAC CAACTGGTTC TCCCTGTGCG CGCCCGCGGG CCTGCCCGAG GACGTGAAAG CCAGGATCGA AGCGGCCGCC GAACAGGCCC ACGGCTCCGC CGAGGTGCAA GAGGCCCTGG CGCAGCGTGG CATCACGCCA CTTTTCGACG GCTCGGAGGC GTTTTCGTCC TATGCCGCGG CCTTCGCCAA TGATGCGGCC GGCCTTCTGA CCGACCTCGG CCTGGCCCAG TAG
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Protein sequence | MTSFKTQIAA VMAGVLALGT SPALADYPER PVTIIVPWGA GGGTDTIIRL FSIGFEEAMG QPINVVNRTG GSGVVGHSAI ANATPDGYTL GACTSEITYF ETIGLAPITP ASFDLISRLA VIPAGVTVAA DSPYNSLEEL IAAAKKGGLS SSGSGLGGPW HMAIAGMMKQ VGGDVNTVQF IPSQGGAPAL QDLVAGGISM FTGSPIEARA LADAGEVKIL GIMSDERSPA FPDVPTLKES GVDWSLTNWF SLCAPAGLPE DVKARIEAAA EQAHGSAEVQ EALAQRGITP LFDGSEAFSS YAAAFANDAA GLLTDLGLAQ
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