| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2252 |
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| Symbol | ribC |
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| ID | 5713905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2372819 |
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| End bp | 2373421 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641268174 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_001533589 |
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| Protein GI | 159044795 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.743387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCACAG GAATAATCAC CGATATCGGC ACCGTGCGCG CCCTCGAACA GGCGGGCGAC
CTTCACGCGC GCATCGGATG TAGCTACGCA CCGGGATCGA TCGCGTTGGG CGCGTCCATT
GCCTGCAATG GCGTATGTCT GACAGTGGTC GACAAGGGGC AGGACGATAC CAGCCCGTGG
TTCGACGTGA CCATCAGCGC CGAAAGCGTC GACAAGACCA ATATCGGCGA CTGGCGTCCC
GGCGCACGGG TCAACCTGGA ACGGGCACTG AAGGTCGGGG ATGAGCTTGG CGGGCATATC
GTGTCGGGCC ATGTGGATGG CGTGGCCGAG ATCACCGCCA TGGCGCAGGA GGGCGAAAGC
ACGCGCGTCA CCTTCCGTGC CCCCGAGGCC CTGGCGAGGT TCATCGCGCC CAAGGGATCT
GTCGCGCTCG ACGGCACATC GTTGACCGTC AACGAGGTCG ATGGGGCGGA ATTCGGCGTG
AATTTCATTC CCCATACCAA ATCTGCGACC ACATGGGGCG GCGTGAAGGT CGGCGACCGC
ATCAACCTCG AAATCGACAC GCTGGCCCGC TATGTCGCGC GGCTGCAGGA GTGGCAGCCG
TGA
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| Protein sequence | MFTGIITDIG TVRALEQAGD LHARIGCSYA PGSIALGASI ACNGVCLTVV DKGQDDTSPW
FDVTISAESV DKTNIGDWRP GARVNLERAL KVGDELGGHI VSGHVDGVAE ITAMAQEGES
TRVTFRAPEA LARFIAPKGS VALDGTSLTV NEVDGAEFGV NFIPHTKSAT TWGGVKVGDR
INLEIDTLAR YVARLQEWQP
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