| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2121 |
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| Symbol | |
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| ID | 5713117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2251923 |
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| End bp | 2252720 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641268043 |
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| Product | putative spermidine/putrescine transport system permease protein |
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| Protein accession | YP_001533458 |
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| Protein GI | 159044664 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAACG AAAACCGTAT CATCAATATC CTGCTCAAGG TGCATATCGC CCTTTGCCTG
CTGTTCATCT TCGCGCCGAT CGCGGGCAGC TTCGTGTTCT CGCTCAATTC CGACCGGTTC
CCGTCCCTGC CTCTGGGGGA GTTCTCGACC GAATGGTACC GCCTGATCTG GGAGGACCCG
CTGGTCTGGC AGGGCTTCGG CAACACGCTG GTGGTGGGCC TGACGGTCGC CGTCATCGCG
ACCTTGCTGG GTTTCGGCGG GGCGTATACC GATTTCCGCT ACAACTTCAC GGGCAAGTCC
TTCTACGTGG CCTTGGCGCT CTTGCCGCCG ACGATCCCGG TCGTGATCCT GGGGCTGGCG
ATGCTGGCCT TTCTCAGCCG GGTGAACCTG TCGGGCACGA CGATTTCGGT CATCATCGCT
CACGGTGTCA TGTGCAGCCC CTTTGCCATG GCGATCATCC GGCTGCGTCT GTCGCAGATG
GACCCGGACC TCGAAGCGGC CTCGTGGAAC ATGGGCGGCA ACCAGTGGCA AACCCTGCGC
TATGTCATCA TCCCCTTCGC CAGACCCGCG ATCTTCGCGG CGCTCTTCAT CACCATGGCC
GTGTCCTTCG ATGAATTCGC GGTGGCCTGG TTCGTGTCGG GGCTCAACGA AACCTTGCCC
GTCAAGATCC TCGGCTTCCT GCAAGGTCAG GTCAGCCCGC GCATCAACGC CATCGGGTCG
CTCCCCTTCC TGAGTTCCAT GACGCTGATC ATCTTGGCCC AGCTTCTGCT GCGCAGCCCG
GAGGACAAGA AATCATGA
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| Protein sequence | MGNENRIINI LLKVHIALCL LFIFAPIAGS FVFSLNSDRF PSLPLGEFST EWYRLIWEDP
LVWQGFGNTL VVGLTVAVIA TLLGFGGAYT DFRYNFTGKS FYVALALLPP TIPVVILGLA
MLAFLSRVNL SGTTISVIIA HGVMCSPFAM AIIRLRLSQM DPDLEAASWN MGGNQWQTLR
YVIIPFARPA IFAALFITMA VSFDEFAVAW FVSGLNETLP VKILGFLQGQ VSPRINAIGS
LPFLSSMTLI ILAQLLLRSP EDKKS
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