Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2011 |
Symbol | |
ID | 5713006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2130480 |
End bp | 2131292 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641267935 |
Product | putative ABC transporter inner membrane component |
Protein accession | YP_001533351 |
Protein GI | 159044557 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.050434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0106691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCCC GGCTGGAGGA TATGGTCGGC ACGCCCTGGC GCAAGCCGCC TTTCGTGCGC AGCGCGGCAC TGCGCTGGAC CCTGATCGTG GGCACCATCG CCTATCTGAT TGCCGCCTTC GCCACCATCG AGGTCGATTG GGGCCGGGTC TATATCGGGC TGGAGCGGGG CTGGCAGTTC ATCCTGGGCT TTGCCAATCC GGATTTCACC TCGCGTGGCA AGGATATCTG GGAGGGGCTG CTGGAGAGCA TCGTGATGAC GGTGGCGGCC TCGGTGGTGG GGATCGCGAT CTCGATCCCC ATCGCGCTGG GGGCGGCGCG CAACATCGCG CCACTGCCGG TCTACCTGGT GTGTCGGGCG ATCATCGCCG TGAGCCGGGC GTTGCAGGAA ATCATCGTCG CGATCCTGCT GGTCGCGATC TTCGGCTTCG GGCCACTGGC GGGGTTCCTG ACCCTGTCCT TCGCGACCAT CGGGTTTCTG TCGAAGCTTC TGGCTGAAGA CATCGAATCC ATGGACCGGG TGCAGGCCGA GGCGATCAAG GCCTCGGGCG CGAGCTGGAT GCAGTGGATC AACTACGGCG TGCAACCCCA AGTGATGCCA CGCCTCATCG GTCTGAGCAT GTACCGGATC GACATCAATT TCCGCGAGAG CGCGATCCTT GGGCTCGTGG GTGCGGGCGG GATCGGGGCG ACTTTGAACA CCGCCTTCGA CCGCTATGAA TACAACACGG CGGCGGCGAT ATTGCTGCTG ATCATCGGGA TCGTGATGGC GCTGGAATAC CTCTCCGGCA TCATCCGGGC GCGGGTGCAA TAA
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Protein sequence | MTARLEDMVG TPWRKPPFVR SAALRWTLIV GTIAYLIAAF ATIEVDWGRV YIGLERGWQF ILGFANPDFT SRGKDIWEGL LESIVMTVAA SVVGIAISIP IALGAARNIA PLPVYLVCRA IIAVSRALQE IIVAILLVAI FGFGPLAGFL TLSFATIGFL SKLLAEDIES MDRVQAEAIK ASGASWMQWI NYGVQPQVMP RLIGLSMYRI DINFRESAIL GLVGAGGIGA TLNTAFDRYE YNTAAAILLL IIGIVMALEY LSGIIRARVQ
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