Gene Dshi_1987 details

Gene Information

• Locus tag: Dshi_1987
• ID: 5712981
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dinoroseobacter shibae DFL 12
• Kingdom: Bacteria
• Replicon accession: NC_009952
• Strand: +
• Start bp: 2102173
• End bp: 2102721
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 641267910
• Product: hypothetical protein
• Protein accession: YP_001533327
• Protein GI: 159044533

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 35
• Fosmid unclonability p-value: 0.758744
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGATCG CCTGCACCAT GTCCAATGCG CGCGGCGGCA CCGACCTGCT GCTCTGGAGC 
CTCGCGGCCC GGATGCAGGC AGCCGGCGTC ACCCTGTGCG GCACAGTCCA GACCAACACC 
GATTGCGGCG ACGACAAGCC CTGCGACATG GATGTCAAGA TCCTGCCCGA CGGGCCGGTG 
GTCCGCATCT CCCAAAGCCT CGGCGCGGGG TCCCGGGGGT GTCGGCTCGA CCCGCAGGCC 
CTGGAAAGCG CGATCGGGCT GTCGGAGGCG TTCCTGCCCC AGGCGGACCT ACTCTTTGTC 
AACAAGTTCG GCAAGCAGGA GGCCAGCGGC CGCGGCTTCC GGCCCCTGAT CGCCGAGGCG 
CTGGCCCGCG ACATCCCCGT GCTCGTGGGG CTCAACAGCC TCAATGCCGA GGCCTTCGAG 
ACCTTCACCG GCGGGATGGC CGAACGGCTG GAGCCGACCG AGGCCGCGGT GGAGGCATGG 
CTCTGGACCG CGCTCGGCAG TGACCCGGAC CGCTGGGCCG CCACCCGCGG CGCGCGCCAG 
AGCGCCTGA 

 

Protein sequence

MKIACTMSNA RGGTDLLLWS LAARMQAAGV TLCGTVQTNT DCGDDKPCDM DVKILPDGPV 
VRISQSLGAG SRGCRLDPQA LESAIGLSEA FLPQADLLFV NKFGKQEASG RGFRPLIAEA 
LARDIPVLVG LNSLNAEAFE TFTGGMAERL EPTEAAVEAW LWTALGSDPD RWAATRGARQ 
SA