Gene Dshi_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1838 
Symbol 
ID5712830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1919720 
End bp1920058 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content60% 
IMG OID641267762 
Productputative nitrogen regulation protein PII 
Protein accessionYP_001533181 
Protein GI159044387 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TCGAGGCTGT CATCAAGCCA TTCAAACTCG ATGAAGTGAA GGAAGCCCTC 
CAAGAGATTG GCGTGCAGGG ACTTTCGGTC GTCGAGGTCA AGGGCTTCGG ACGCCAGAAG
GGACATACCG AGCTCTACCG GGGCGCGGAG TATGTCGTGG ACTTCCTCCC GAAGGTGAAA
ATCGAGGTCG TCCTGCCGGA CGATCAGGCG GACGCGGCCA TCGAGGCCAT CGTCGAGGCC
GCCAAGACCG ACAAGATCGG CGACGGCAAG ATTTTCGTTT CCTCGGTCGA GCAGGCCATC
CGTATCCGCA CCGGGGAAAC CGGCGAAGAC GCACTCTGA
 
Protein sequence
MKKIEAVIKP FKLDEVKEAL QEIGVQGLSV VEVKGFGRQK GHTELYRGAE YVVDFLPKVK 
IEVVLPDDQA DAAIEAIVEA AKTDKIGDGK IFVSSVEQAI RIRTGETGED AL