| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1360 |
|---|
| Symbol | |
|---|
| ID | 5712536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 1412275 |
|---|
| End bp | 1413312 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641267272 |
|---|
| Product | protein of unknown function DUF1486 |
|---|
| Protein accession | YP_001532703 |
|---|
| Protein GI | 159043909 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.602593 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACC AGACCACCGC TGAGTTGCAA GAGGCCAAGG CTCGGGTGCG CGCGCTGAAT
GCCGCGCTCG AGGGGGCCAT GGCCGCTGAC AAGGCGGCGG CGCTGGCCGA TCACGTCGCG
CCGGACTGGC ACTGGCGCGG GATGCACCCG TTTCACGAGC AAACCGGGCC CGACGCGGTG
GCCCGCGCGT TCTGGACCCC CCTGGCCGAG AGTTTCACCA GCCTGCACCG CCGCGAAGAC
GTGTTTTTCG CGGGCCAGAG CACGCTGGGG GCCACGCCGC AGGTGTGGGT TTGCGCCATG
GGGCACCTGA CCGGGCTTTT CGACCGCGAT TTCCTCGATA TTCCGGCCAC GGGCAAGCTC
ACCTGGCTGC GCCATGCCGA GTTTCACCGG GTCTCGGACG GGCGCATCGT CGAGACCGCA
CTCTTCGTGG ACCTTTTGGC CCTGATGCAC CAGGCGGGGG TCTATCCGCT GCCCCCCGCC
ACGGGCGCGA TGGCGATCTA TCCCGGCCCG CGCACCCATG ACGGGCTACT GACCGGCCCC
CATGATCCGG CCGAGGGGGC CGCGACACTG GCGCTGGTCG AGCGGATGGT GGCGGACCTG
TCTGCGCTGA ACCGATCCGG CAACGACCGC GCCGGGATCG AGATGCTGCG CGCGTCCTGG
CATGACGACA TGACCTGGTA CGGCCCCTTC GGCATCGGGG CCACCCACAC CTTGCCGCGA
TACCAGGACC AACACACATT CCCCTTCCGG CTGAGCCTGG GGGACAAGAC CTTCAACGGC
CATGTCGCAC GGCTGGCCGA GGGAAATTAC GGCGCGTTCT TCGGCTGGCC GAACCTCACC
AATACCTCCA AGGGCGGGTT TCTGGGCCTG CCCGGGTCCG GCACACCTGC CGACATGCGG
GTGGTCGATA TCTATCGCCG CGCGGGCGAC AAGCTGGCCG AGAACTGGGT GTTCATCGAC
CTGCTGCATT ACCTGAAGAT GCAGGGCCTC GACGTGCTGG AACGGAACCG GCAGCTGCGC
CGGATCTCAC ACCCCTGA
|
|---|
| Protein sequence | MTDQTTAELQ EAKARVRALN AALEGAMAAD KAAALADHVA PDWHWRGMHP FHEQTGPDAV
ARAFWTPLAE SFTSLHRRED VFFAGQSTLG ATPQVWVCAM GHLTGLFDRD FLDIPATGKL
TWLRHAEFHR VSDGRIVETA LFVDLLALMH QAGVYPLPPA TGAMAIYPGP RTHDGLLTGP
HDPAEGAATL ALVERMVADL SALNRSGNDR AGIEMLRASW HDDMTWYGPF GIGATHTLPR
YQDQHTFPFR LSLGDKTFNG HVARLAEGNY GAFFGWPNLT NTSKGGFLGL PGSGTPADMR
VVDIYRRAGD KLAENWVFID LLHYLKMQGL DVLERNRQLR RISHP
|
|---|
| |