| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1345 |
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| Symbol | tatC |
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| ID | 5711911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1397430 |
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| End bp | 1398470 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267257 |
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| Product | sec-independent protein translocase |
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| Protein accession | YP_001532688 |
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| Protein GI | 159043894 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.634552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.127965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAC CCGACGAAAT AGAAGACAGC AGCGCCCCGC TGATCGAGCA TCTGGCAGAG
CTGCGCACCC GGCTGATCCG CTCGGTGCTG GCCTTCATCG TGGGCATCGT GCTGGCCTTC
ACCGTGGCCG AGCCGATCCT GCAATTCCTG CTGGTGCCGA TCGAGGAAAC CCTGCGCGAG
CTGGGCGACC CGTCGCCGAC GCTGCAATAC ACCTCGCCCC AGGAATACCT CTTCACGCTG
TTCCGCATCT CCATGGTGTT CGGCTTCGCG CTGTCCTTCC CGGTGATCGC GCACCAGCTC
TGGCGCTTCG TGGCGCCGGG CCTCTACCGC ACGGAAAAGG CGGCGTTTCT GCCCTTCATC
ATCGCCTCGC CCTTCATGTT CCTGCTGGGC GCGAGCTTCG CGCATTTCGT GGTGACACCG
CTCGCCATGG CGTTCTTTCT GGGCTTCGCC GATGTCAGCT CGATCTTCGC CAACCTGCTG
TCGGGGGCCG CGCCCGATGT GCCCGACGGG GTGATCCTCG TGCCGCCCGA GACCGGCCCG
CCGGTCATCT CTCCGGATGT CGATGGCCTG AGCAACATGC CGATCATCGT GCCGGAAACC
GAGGAGGGCG TGCGCATCAC CTTCTTCGGC AAGGTGAACG AAAGCCTCGA CATCACCCTG
AAATTCATCA TGGCTTTCGG GCTGTGTTTC CAGCTGCCTG TTCTGCTGAC GCTGATGGGC
AAGGCGGGGC TGGTCTCGGC CGAGGGGCTG GGGACCGTGC GCAAATACGC CATGGTGGGC
ATCCTGCTGC TGGCGGCACT GGTGACCCCG CCCGACGTGG TCACGCAGCT GATCCTCTTC
GTGGTGGTCT ACGGGCTCTA CGAGGTGTCG ATCTTCCTCG TGCGCCGCGT CGAGAAGAAG
CGCGAGAAGG AGCTGCGCGC GCAAGGTTTG TGGGATGAAG ACGACGACGC CCCCGACCTT
GAGGACGACC CGCTTTACGA CGAGTTCCGC GACGACGACG ATCCGGCGGC CAAGCCGGGC
CCGGGAGGCA ACAAGATTTG A
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| Protein sequence | MSKPDEIEDS SAPLIEHLAE LRTRLIRSVL AFIVGIVLAF TVAEPILQFL LVPIEETLRE
LGDPSPTLQY TSPQEYLFTL FRISMVFGFA LSFPVIAHQL WRFVAPGLYR TEKAAFLPFI
IASPFMFLLG ASFAHFVVTP LAMAFFLGFA DVSSIFANLL SGAAPDVPDG VILVPPETGP
PVISPDVDGL SNMPIIVPET EEGVRITFFG KVNESLDITL KFIMAFGLCF QLPVLLTLMG
KAGLVSAEGL GTVRKYAMVG ILLLAALVTP PDVVTQLILF VVVYGLYEVS IFLVRRVEKK
REKELRAQGL WDEDDDAPDL EDDPLYDEFR DDDDPAAKPG PGGNKI
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